Salmonella enterica subsp. enterica serovar Typhimurium DT104: DT104_21841
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Entry
DT104_21841 CDS
T02874
Symbol
alkA
Name
(GenBank) DNA-3-methyladenine glycosidase II
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
send
Salmonella enterica subsp. enterica serovar Typhimurium DT104
Pathway
send03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
send00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DT104_21841 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
send03400
]
DT104_21841 (alkA)
Enzymes [BR:
send01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
DT104_21841 (alkA)
DNA repair and recombination proteins [BR:
send03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DT104_21841 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
CCW74887
LinkDB
All DBs
Position
complement(2279143..2280012)
Genome browser
AA seq
289 aa
AA seq
DB search
MFTLSWQPPYDWSWMLGFLAARAVDGVETVGEGFYARSLVVGEHRGLVSVRPHLPTHTVQ
VSVSAGLLPVAPACLAKVSRLFDLDCQPAQVAAVLGPLGEDRPGLRLPGSVDTFEQGVRA
ILGQLVSVAMAARLTAKVARRYGEALPDAPDYVCFPGPETLALADPLALKALGMPLRRAE
ALIHLAQATLAGKLALAAPPDIEQSVKNLQTFPGIGRWTANYFALRGWQAKDIFLPDDYL
IKQRFAGMTPAQIRRYAERWKPWRSYALLHIWYTHGWQPSMDSEIAGIQ
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgtttaccctgagctggcagccgccttacgactggtcgtggatgttgggctttcttgcc
gcgcgtgcggtggacggcgtggaaacagtaggcgagggcttttatgcgcgcagcctggtg
gtgggcgagcatcgcggactggtcagcgtgaggccccatctgcccacccacactgtgcag
gttagcgtgagcgccggattacttcccgtcgcgccggcgtgtctggcgaaagtttcgcgt
ctgtttgatcttgactgccagcccgcgcaggttgccgccgtgctggggccactgggcgag
gacagaccggggctgcgtttaccgggatcggttgatacgtttgaacagggcgtgcgggcg
atactggggcaactggtgagtgtcgcgatggcggcaaggttgacggcgaaagtggcgcgc
cgctatggcgaggcgttgccggatgcgcccgattatgtctgttttcccggtccggaaacg
ctggcgttggccgatccgctggcgcttaaagctctggggatgccgctgcggcgcgccgaa
gcgctgattcatctggcgcaggcgacgctggcgggaaaactggcgctcgccgcgccgccg
gatattgagcagagcgttaaaaatttacaaacgtttccgggaattggccgctggacggcg
aactatttcgccctgcgcggttggcaggcaaaagatatctttttgcccgatgattactta
attaagcagcgcttcgccgggatgacgcccgcgcagatccgtcgctacgcggagcgctgg
aaaccgtggcgttcctacgcgctactgcatatctggtatacccacggctggcaaccgtca
atggatagcgaaatagctggtattcagtaa
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