Salmonella enterica subsp. enterica serovar Typhimurium DT104: DT104_27761
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Entry
DT104_27761 CDS
T02874
Symbol
iroC
Name
(GenBank) putative ABC transporter protein
KO
K18895
ATP-binding cassette, subfamily B, salmochelin/enterobactin exporter
Organism
send
Salmonella enterica subsp. enterica serovar Typhimurium DT104
Pathway
send02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
send00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
DT104_27761 (iroC)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
send02000
]
DT104_27761 (iroC)
Transporters [BR:
send02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
DT104_27761 (iroC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
RsgA_GTPase
SMC_N
AAA_29
AAA_25
ABC_ATPase
AAA_21
AAA_16
AAA_22
MMR_HSR1
nSTAND1
NACHT
AAA_28
Dynamin_N
AAA_30
FtsK_SpoIIIE
SbcC_Walker_B
ABC_membrane_3
Motif
Other DBs
NCBI-ProteinID:
CCW75476
LinkDB
All DBs
Position
2952814..2956467
Genome browser
AA seq
1217 aa
AA seq
DB search
MPATHSPMPARAWIVRLARVCWERKTLSIIVIVASVSTILLAALTPLITRQAVNDAIAGD
TTHLPLLACGLLLIALFDFIGNYVRRGYAGELSLWVQHTLRSRAFDSIQKLDGAGQDALR
TGQVISRTNSDLQQVHTLLQMCPVPLAVLTYYVAGIAVMLWMSPSMTLIVICVLAALAIT
ALRARRRVFAQTGLASDRLAHMTEHMREVLEQISVVKSCVAELRETRWLDGQSRQMVRVR
IGAAISQAMPGATMLALPVIGQIVLLCYGGWSVMNGRIDLGTFVAFASFLAMLTGPTRVL
ASFLVIAQRTQASVERVFALIDTRSRMEDGTESVEGQIIGLDVEKMSFHYDNGNRILNEI
SFSIHAGETVAVVGASGSGKSTLLMLLARFYDPTSGGVWLNTTAGQQNIRDLKLTALRRR
VGVVFEDAFLFAGTVAENIAYGHPQATQDDIRRAADAAGASGFINALPQGFNTRLAERGS
NLSGGQRQRIALARALITAPELLILDDTTSAVDAGTEAEINTALGRYADNEHMLLVIARR
RSTLQLADRIVVLDKGRVVDIGTQAELDARCPTFRSLMSGEGDFLALAPAEQRTLWPTTQ
AVKSDDAHERQTPAGKGFVDRMTRVPERAVQMALAGHGRQVSSLLTPVAWMFVIAALLIA
LDSAAGVGVLVLLQRGIDSGVAAGDMSTIGICALLALCLVAIGWCCYALQTIFAARAAES
VQHTVRLRSFSHLLRLSLPWHEKHIDSRLTRMTVDVDSLARFLQNGLASAATSIVTMVAI
AAAMFWLDPILALTALSAVPVVMLATWIYRRLSSPAYAQARLEIGKVNSTLQEKVSGMRV
VQSHGQQQQEAARLRALSDNFRATRVRAQKYLAVYFPFLTFCTEAAYAAVLLIGASRVAG
GEMTPGILAAFFLLLGQFYGPVQQLSGIVDSWQQATASGKHINALLATEETENIEPSSIT
PGTGALRLEALTFLYPEKTQPVLDNLSLIIPPGTVVAVVGRSGAGKSTLIKLLAGLYSPG
SGQIRVGERLIDAASLSDYRRQTGLVTQDVALFSGDIAENIRYPRPDSSDTEVESAARRA
GLFETVQHLPLGFRTPVNNGGTDLSAGQRQLIALARAHLAQAHILLLDEATARIDRSAEE
RLMTSLTRVTHTEKRIALIVAHRLTTARRCDVIVVIDKGCIAEYGSHEQLIAAHGLYARL
WRNSIGQTRDTQGEVIG
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcgactcattcccccatgcccgctcgtgcctggatagttcgccttgcccgcgtg
tgttgggaacgtaaaacactgagcatcattgtcatcgtagcatcagtatcgaccatttta
ctggctgcgctgacgccgctaataacgcgtcaggccgtcaatgacgcgatagcaggcgat
acgacccacctgccgttacttgcctgcggcctgctgttaattgccctttttgattttatc
gggaattacgtgcgccgcggctatgccggagaactctcgctgtgggttcagcatacgtta
cgtagccgtgcgttcgacagtattcaaaaactggacggcgcaggccaggacgccttgcgt
accgggcaggtcatttcgcgtaccaacagcgatcttcaacaggtacacaccttgctacaa
atgtgcccggtgccgctggcggtactcacttactatgtggccggtatcgcggtgatgcta
tggatgtcgccatccatgacgcttatcgtgatttgcgtactggccgcccttgccattacc
gccctgcgcgcccgtcgccgtgttttcgcgcaaacggggcttgcctcagaccggctggcg
cacatgacggaacatatgcgcgaagtattggaacagatctcagtggtgaagtcctgcgtg
gcggagttgcgcgaaacgcgttggctcgatggtcagtcgcggcagatggtgcgggtacgc
atcggcgccgctatctcgcaggcgatgccgggcgcaaccatgctggcgctaccggtgata
gggcaaatcgtcctgctgtgctatggcggctggtcggtaatgaatgggcgcatcgatctg
ggaaccttcgttgcgttcgcgagttttctcgctatgctgaccggccctacccgcgtactg
gcatcgtttttggttatcgcacagcgcacacaggcgtcggtggagcgcgtcttcgcgctt
atcgacacgcgttctcgcatggaagacggtactgagtcggttgaaggtcagattatcggg
ctggacgtggagaagatgagtttccactacgacaacggtaaccgtatcctcaatgagatc
tcgttttccattcacgccggtgaaaccgtggcagtggttggcgcctccggctccggaaaa
tcaacattgctgatgttgctggcgcgcttttacgatcccacctccggcggggtgtggctc
aacaccactgcgggtcaacagaatattcgcgacctgaaactgacggcgcttcgtcgtcgc
gttggcgtagtttttgaagacgcgtttctgtttgccggtacggtggcggaaaacatcgcc
tatgggcacccgcaagcgactcaggacgacattcgacgcgccgccgatgccgcaggcgcc
agcgggttcatcaatgcgctaccgcaggggttcaacacccgactggccgaacgcggaagc
aacctctccggcggccaacgccagcgtattgcgctagcccgggcactgattaccgcgccg
gaactgctgattctcgatgacaccacctcggcggtcgatgccggtactgaagcggaaatt
aacacggctcttggtcgttatgccgataatgagcatatgctgctggtgattgcacgccgc
cgttcaacactgcagttagccgatcggatcgtcgtgctggataaaggccgcgtcgtggat
atcggtacccaggcggagctggatgcaaggtgtccgacgtttcgctcgctgatgagcggc
gagggggattttctcgcccttgccccggcagaacaacgtacgctatggccaacaacgcag
gcggtaaaatccgacgacgcgcatgagcgccagacacccgccggaaaaggttttgtcgac
cggatgacgcgcgttccagaacgcgccgtacagatggcgctggcaggccacgggcgtcaa
gtctcatcgctgctgacgccagtagcctggatgttcgtcatcgccgccctgcttatcgcg
cttgattccgccgcaggcgttggcgtgctggtgcttttgcagcgcggtattgactcaggc
gttgccgcaggggatatgtcgactattggcatatgcgccctgctcgcgctgtgcctggtg
gcgatcggttggtgctgctatgcgctgcaaacgatcttcgccgcccgcgcggcagagtcg
gtacagcatacggtacgcttacgcagcttcagccacctgctacgcctgagtcttccctgg
cacgagaagcacatcgactcgcgtcttactcgcatgaccgtcgacgttgattcactcgcc
cgatttctgcaaaacggtcttgccagcgcggccaccagcatcgtgacgatggtcgctatc
gccgcggcaatgttctggcttgaccccattcttgcgttaacggcattaagcgccgtgcct
gtagtgatgctggcgacgtggatttaccgccgtttgagctcgcctgcctacgcccaggca
cggctggaaattggtaaggtgaacagtacgcttcaggaaaaggtctccggtatgcgggta
gttcagtcacacggccaacaacagcaggaagccgccaggctacgggcgttatcagacaac
ttccgcgccacccgcgtgcgggcgcaaaaataccttgccgtttattttccgttcctgacc
ttctgcaccgaggctgcctatgccgccgtgcttttaatcggggcgagccgggtcgccgga
ggcgaaatgacgcccgggatactggcggcgttcttcctgctactgggacaattttatggc
ccggtacagcagttgtcaggcattgttgattcctggcagcaggcgaccgccagcggcaaa
catatcaatgcgctattggcgactgaggaaacggagaatattgaaccgtcctccataaca
cctggcactggcgcgctacgtctggaggcattgacattcctctatcccgaaaaaacgcaa
cctgtgcttgataatctctcgctcattattccgccaggaacggtagtcgcggtggtcgga
cgtagcggcgctggcaaatcgacgctgatcaagctgctggccgggctctactctcccggt
agcggacaaatccgtgtcggtgagcgcttaattgatgccgcgtcgcttagtgattatcgt
cgccagacggggctggtcactcaggatgtcgcattatttagcggcgatattgccgaaaat
atccgctatccgcggccagacagcagcgacacggaggtggagagcgcggcgcgacgggcg
ggactctttgaaactgtgcaacatctgccgctggggtttcgtactccggtcaataacggc
ggcacggatctgtccgcgggccagcgtcagttgattgccctcgcccgcgcccacctggcg
caggcgcatattctgctgctcgacgaggcgacagcgcgtatcgaccgtagcgccgaggag
cgcttaatgacctcgctgaccagggtgacgcataccgagaaacgcatcgcgcttatcgtc
gcgcaccggctgaccaccgctcgccgctgcgatgtgattgtcgtaatcgataaaggatgt
atcgctgaatatggcagccatgagcagttgatagcggctcatggcctgtatgctcgtctg
tggcggaacagcatcggccagacacgcgatacgcaaggagaggtcataggatag
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