Salmonella enterica subsp. enterica serovar Typhimurium DT104: DT104_29921
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Entry
DT104_29921 CDS
T02874
Symbol
recC
Name
(GenBank) exonuclease V subunit
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
send
Salmonella enterica subsp. enterica serovar Typhimurium DT104
Pathway
send03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
send00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DT104_29921 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
send03400
]
DT104_29921 (recC)
Enzymes [BR:
send01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
DT104_29921 (recC)
DNA repair and recombination proteins [BR:
send03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
DT104_29921 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
CCW75692
LinkDB
All DBs
Position
complement(3186690..3190061)
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AA seq
1123 aa
AA seq
DB search
MLRVYHSNRLDVLEALMEFIVERERLDDPFEPEMILVQSTGMAQWLQMTLSQKFGIAANI
AFPLPASFIWEMFVRVLPDIPKESAFSKQSMSWKLMTLLPQLLDKDEFVLLRHYLTDDTD
KRKLFQLSARAADLFDQYLVYRPDWLTQWEAGKTVEGLGEAQNWQAPLWKALVEYTAALG
QPRWHRANLYQRFIQTLESATACPPGLPSRVFICGISALPPVYLRALQALGKHIEIHLLF
TNPCRYYWGDIKDPAWLAKLMARQRRHSFEDRHLPLFRENQNPEALFNSDGEQDIGNPLL
ASWGKLGRDYIYLLSELENSQELDAFVDITPDNLLHRIQADILELESHAVAGVNLEEYSR
SDNKRLLDPEDNSLSFHVCHSPQREVEILHDRLLAMLEADPTLTPRDIIVMVADIDSYSP
FIQAVFGSAPTERYLPYAISDRRARQSHPVLQAFISLLSLPDSRFVSEDVLALLDVPVLA
ARFTINEEGLRYLRLWVNESGIRWGIDDDNVRELELPATGQHTWQFGLTRMLLGYAMESA
QGEWQSVLPYDESSGLIAELVGHLASLLMQLNIWRRGLAQERPLEEWLPVCRDMFNDFFL
PDADTEAAMTLIEQQWQAIIAEGVAAEYGDAVPISLLRDELAQRLDQERISQRFLAGPIN
ICTLMPMRSIPFRVVCLLGMNDGVYPRQLAPLGFDLMSQKPMRGDRSRRDDDRYLFLEAL
ISAQQTLYISYIGRSIQDNSERFPSVLVQELVDYIGQSHYLPGDETLTCDESEARVKAHI
TRLHTRMPFDAQNYQPGEQQSYAREWLPAASQSGKAHSDFVQPLPFTMPETLTLESLQRF
WAHPVRAFFQMRLQVNFRSEESEIPDAEPFELEGLTRYQLNQQLLNTLVEEDDAERLFRR
FRAAGELPYGAFGEIFWDAQCQEMQQLASRVIACRKPSQSLEVDLLCNGVQLTGWLPQVQ
EDGLLRWRPALISVAQGVQLWLEHLVYCASGGSGESRLFLRKEGEWRFPPLDKTQAMAYL
AQLIEGYREGMSSPLLVLPESGGAWIKACYDAENDVMLDDDDTLQKARTKFLQAYEGNMM
VSGEGEDIWYQRLWRQLESETLQAIIAQSRHYLLPLFRFNQSR
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atgttaagggtctaccactccaatcgtctggatgtgctggaagcgttgatggagttcatc
gtcgaacgcgagcggctggatgatccctttgaaccagaaatgattctggtacaaagcacg
ggtatggcgcagtggctgcagatgaccctttcacaaaagtttggtattgcggcgaatatc
gcttttccgttaccggcgagttttatctgggagatgtttgtccgcgtgttgccggatatt
cccaaagaaagcgctttcagcaaacaaagcatgagctggaaactgatgaccttgctgccg
cagttgctggataaggatgagtttgtactgctgcgccattatctgaccgacgacaccgat
aaacgcaaactctttcagctttccgcgcgcgccgccgacctgttcgatcagtatctggtt
tatcggcctgactggcttacgcagtgggaagcgggaaaaaccgtggaaggtctgggagag
gcgcaaaactggcaggcgccgttgtggaaagcattggtggaatataccgccgcgctgggg
cagccgcgctggcatcgcgccaatctctaccaacgctttattcaaacgctggaaagcgcg
accgcctgcccgccagggttgccgtcccgcgtttttatttgcggcatttccgcgttaccg
ccagtgtatctcagagcattgcaggcgctgggtaaacatattgaaatccatctccttttt
actaatccgtgtcggtattactggggggatataaaagacccagcctggctggcaaaactc
atggctcgccagcgtcgtcacagttttgaagaccgtcatttaccgttgttccgtgaaaac
cagaatccggaagccttatttaacagcgacggtgaacaggatatcggtaatccgctactg
gcctcatggggaaaactggggcgggattatatctacctgctatctgaactggaaaacagc
caggaactggatgcgtttgttgatattacgccagataatcttttgcatcggattcaggcg
gatattcttgaactggaaagccatgcggtggcgggcgtaaatcttgaggagtattcgcgc
agcgacaataagcgtctgctcgatcccgaggataacagcctctcttttcacgtttgtcac
agcccgcagcgcgaggtggaaatactgcacgatcgcctgctggcgatgctggaagccgat
ccgacgctaacgccgcgcgacattatcgttatggtggctgatattgacagctatagcccg
tttatccaggcggtatttggtagcgcgccaacggagcgctatctgccttatgccatttcc
gatcggcgggcgcgtcagtcacatccggtgttacaggcatttatcagcctgctttcgtta
ccggacagccgcttcgtctccgaggatgttctggcgttgttagacgtaccggtattggct
gcccgctttacgatcaacgaagaagggctgcgttatttgcgcttgtgggtcaatgagtca
ggcattcgctggggaattgacgatgacaacgtacgcgagctggaacttcctgccacgggg
cagcatacgtggcaatttggcctgacgcgtatgctgctggggtatgcgatggaaagcgcc
cagggcgagtggcagtcggttctgccttatgacgaatccagcggtctgattgctgagctg
gtcgggcatctggcttcgctgctgatgcagcttaatatctggcggcgcggtctggcgcag
gagcgaccgctggaagagtggctgcccgtttgtcgcgatatgttcaatgatttcttcctg
cccgatgcggacacggaagcggcaatgacattgattgaacagcagtggcaggccattatc
gccgaaggcgtcgcggcggaatatggcgacgcggtaccgatttcgctactgcgggatgaa
ctggcgcagcgtctggatcaggaacgtattagccagcgcttcctggcgggccccatcaat
atttgtacgctgatgccgatgcgttccattccgtttagagtcgtttgcctgctgggaatg
aacgacggcgtatacccgcgccagcttgcgccgttgggctttgacctgatgagccaaaaa
cccatgcgcggggatcgtagccgtcgcgacgatgaccgctacctgtttctggaagcgtta
atctcggcgcagcagacgctgtatatcagctacatcggtcgctccatccaggataatagc
gaacgctttccctctgtactggtgcaagaattggtggattacatcggacaaagccactat
ttgccgggcgacgaaacgctgacctgtgatgagagcgaagcacgagtcaaagcgcatatt
acgcgtctgcatacccgtatgccttttgatgcgcaaaattaccaacccggcgaacagcaa
agttatgccagagagtggttgcccgcggcgagtcagtcgggaaaagcgcattctgacttt
gtgcagccgcttccttttacgatgccggaaacattgactctggaaagtctgcagcgtttt
tgggcccatccggtacgcgcattttttcagatgcggcttcaggttaatttccgctcggaa
gagagtgagattcctgatgcggaaccgtttgaattagagggattgacgcgatatcaactt
aaccaacagttgctcaatacgctggttgaagaggacgacgccgaacgcttgttccgccgt
ttccgggctgcgggagagttgccttacggcgcgtttggcgaaatattctgggatgcgcaa
tgtcaggagatgcagcaactggcaagccgggtcatcgcctgccgtaagccgagccaaagc
ctggaagtggatctgctttgcaatggcgttcagctaaccggctggctgccgcaggtacag
gaggatggattattgcgctggcgtcccgctttaatcagcgtggcgcaaggtgtgcaactt
tggctggaacaccttgtctattgtgccagcggcggtagtggcgaaagtcgcctgtttttg
cgtaaagagggagagtggcgatttccgcctcttgataaaacgcaggcaatggcttacctg
gcgcaactgattgaaggctaccgggaaggcatgtcttctccgctattggtactgccggaa
agcggcggcgcatggataaaagcctgttatgacgctgaaaatgatgtcatgttagacgac
gatgatactttacagaaggccaggacaaagtttctacaggcttatgaaggcaacatgatg
gtgagcggcgaaggcgaagatatctggtatcaacgtctttggcgtcagctggaatctgaa
acgttgcaggctatcattgcgcagtcacggcattacctgttaccgctgtttcgttttaat
cagtctcgttga
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