Salmonella enterica subsp. enterica serovar Typhimurium DT104: DT104_33131
Help
Entry
DT104_33131 CDS
T02874
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor (sigma-N)
KO
K03092
RNA polymerase sigma-54 factor
Organism
send
Salmonella enterica subsp. enterica serovar Typhimurium DT104
Pathway
send02020
Two-component system
send02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
send00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
DT104_33131 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
DT104_33131 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
send03021
]
DT104_33131 (rpoN)
Transcription machinery [BR:
send03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
DT104_33131 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
Motif
Other DBs
NCBI-ProteinID:
CCW76012
LinkDB
All DBs
Position
3517671..3519104
Genome browser
AA seq
477 aa
AA seq
DB search
MKQGLQLRLSQQLAMTPQLQQAIRLLQLSTLELQQELQQALENNPLLEQTDLHDEIDTQQ
PQDNDPLDTADALEQKEMPEELPLDASWDEIYTAGTPSGPSGDYIDDELPVYQGETTQSL
QDYLMWQVELTPFSDTDRAIATSIVDAVDDTGYLTVSLDEIRESMGDVEVDLDEVEAVLK
RIQRFDPVGVAAKDLRDCLLIQLSQFDKSTPWLEEARLIICDHLDLLANHDFRTLMRVTR
LKEEVLKEAVNLIQSLDPRPGQSIQTGEPEYVIPDVLVRKHNGRWTVELNSDSIPRLQIN
QHYAAMCNSARNDADSQFIRSNLQDAKWLIKSLESRNDTLLRVSRCIVEQQQAFFEQGEE
YMKPMVLADIAQAVEMHESTISRVTTQKYLHSPRGIFELKYFFSSHVNTEGGGEASSTAI
RALVKKLIAAENPAKPLSDSKLTSLLSEQGIMVARRTVAKYRESLSIPPSNQRKQLV
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaggtttgcaactcaggcttagccaacaactggcaatgacgcctcagctacaa
caggccatccgtctgttgcagttgtctacgctggaacttcagcaggaactccagcaagcg
ctggaaaataacccgctgcttgagcaaaccgatcttcatgacgaaatcgacacccagcaa
cctcaggataacgatcctctcgataccgccgacgcgctcgaacaaaaagagatgccggaa
gagctgccgcttgacgccagttgggatgaaatttacaccgccgggacgccgtccggcccc
agcggcgattatatcgacgatgagctgcccgtctatcagggcgaaacgacgcagtcgttg
caggattatctgatgtggcaggttgagctaacgcccttctcggataccgatcgcgctatt
gcgacatccattgtcgacgcggtagatgataccggctatctcaccgtatccctggacgaa
attcgcgaaagcatgggcgatgtagaggtggatctcgatgaggttgaagccgttctgaag
cgcattcagcgttttgatccggtaggcgtcgcggcaaaagatcttcgcgactgtctgctg
atccagctttcacaattcgacaaatccacgccgtggctggaagaggcgcggctcattatc
tgcgatcatcttgatctgctggccaaccacgatttccgcacgttgatgcgcgttacccga
ctaaaagaagaggtgctgaaagaggcggtaaacctgattcagtcgctcgatcccagaccc
ggtcaatcgatccagaccggcgagccggagtacgttatcccggatgtgctggtacgcaag
cataacggtcgctggacggtggagcttaatagcgacagtattccccgtttacagattaac
cagcactatgccgccatgtgcaatagcgcgcgcaacgatgccgacagccagttcatccgc
agtaatttacaggatgcgaaatggctgataaaaagccttgaaagccgtaacgacacgctg
ctgcgcgtcagtcgctgcatcgtcgagcaacagcaagccttttttgaacagggcgaagaa
tatatgaaaccgatggtactggcggatatcgcccaggccgtcgagatgcacgaatccacc
atatcccgcgtgaccacgcagaagtatctgcacagcccgcgcggtatttttgaactcaaa
tatttcttttccagccacgtcaataccgaaggcggaggcgaagcctcttccaccgcgatt
cgcgcgctggtgaagaagttaattgcggcggaaaaccccgcgaaaccactgagcgacagc
aagttaacctctctgctgtcagaacaaggtatcatggtggcgcgccgcactgttgcgaag
taccgagagtctttatccattccgccgtcaaaccaacgcaaacagctggtttga
DBGET
integrated database retrieval system
