Salmonella enterica subsp. enterica serovar Typhimurium DT104: DT104_33671
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Entry
DT104_33671 CDS
T02874
Symbol
yhdA
Name
(GenBank) putative lipoprotein
KO
K18765
RNase E specificity factor CsrD
Organism
send
Salmonella enterica subsp. enterica serovar Typhimurium DT104
Brite
KEGG Orthology (KO) [BR:
send00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
send03019
]
DT104_33671 (yhdA)
Messenger RNA biogenesis [BR:
send03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
DT104_33671 (yhdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GAPES4
GGDEF
GDPD
Motif
Other DBs
NCBI-ProteinID:
CCW76066
LinkDB
All DBs
Position
complement(3578131..3580071)
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AA seq
646 aa
AA seq
DB search
MRLTTKFSAFITLLTGLTIFVTLIGCSLSFYNAVQYKYVSRVQATATAIDTHLVTHDIVS
LTPQIDELMIASDIVRVDLLQGERSVYSHSRARGYRPAGTSDMYRELVVPLIKHPGMSLR
LAYQDPMGNYFHSLITTAPLTLAIGFIVLILFLSVRWLQRQLSGQELLEIRSTRILNGER
GANVRGSVYEWPARTSSALDVLLSEIQFAHEQRSRLDTLIRSYAAQDTKTGLGNRLFFDN
QLATLLEDQEKVGVHGVVMMIRLPDFNLLRDSLGGNQAEEQMFMLINLLSTFIMRYPGSL
LARYHRSDFAVLLPHRTLKEAESIAGQLLKAVDALPANKMLDRDDMVHIGICAWRSGQST
EQVMEHAEAAARNAALQGGNSWAIYDDTLPEKGRGNVRWRTLIEQMLNRGGPRLYQKPAV
TREGRVHHRELMCRIYDGKEEVSSAEYMPMVLQFGLSEEYDRLQISRLITLLGYWPDENL
AMQLTVESLIRPRFQRWLRDTLMQCEKSQRNRIIIELAEADVCQHISRLQPILRLVNALG
VRVAVTQAGLTLVSTSWIKALNVELLKLHPSLVRNIEKRTENQLLVQSLVEACAGTPTQV
YATGVRSRGEWQTLTKRGVAGGQGDFFASSQLLDTNVKKYSQRYSV
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgcgattaacgacgaaattctcagcttttatcacgctgctcacggggttaacgatcttc
gtgactctgataggttgctcgctaagcttttataacgccgtacagtataagtatgtcagc
cgtgtgcaggcgacggcgacagccattgatacgcacctggtgacccatgatattgtctcg
ctgacgccgcaaatcgacgaactcatgatcgcttccgatattgtgcgtgtcgatctgttg
cagggggagcgcagcgtctacagccattctcgtgccagaggttatcggccagccggcacc
agcgacatgtatcgcgagctggtcgtaccgctgataaaacatccaggaatgtcgctacgt
ctggcttatcaggacccgatgggtaactattttcactcactgatcaccacggcgccgcta
acgctggcgatcggttttatcgttctgattttgtttttatcggtgcgctggctgcagcgg
cagctttccgggcaagagcttctggaaattcgctcaacgcgtattctgaacggcgaacgc
ggggcgaatgtccgcggttctgtttacgaatggccagcgcgcaccagtagcgcgcttgat
gtattgctttccgaaattcagtttgctcacgaacagcgtagccgcctggacaccctcatt
cgctcctacgccgcgcaggacaccaaaaccggactcggtaaccgtctgttctttgataac
caactggcgacgctgctggaagatcaggaaaaagtgggagtgcatggcgtggtgatgatg
atccgcttgccagacttcaatcttctgcgcgacagcctgggaggcaatcaggcggaagag
cagatgtttatgcttatcaatctgctatcgacatttattatgcgttaccctggctcgctg
ctggcgcgttatcaccgcagcgactttgccgtgctgctaccgcatcgaacgctgaaagaa
gcggaaagtattgccggacaacttttaaaagctgtcgatgcgctaccggctaacaaaatg
ctcgatcgtgacgatatggtacatatcggcatttgcgcctggcgcagcggacagtccacc
gagcaggtgatggaacatgctgaagccgcggcgcggaatgccgccctgcaggggggaaat
agctgggctatctacgacgacactctgccggaaaaagggcgcggcaatgtgcgctggcgc
acattgattgagcagatgctgaaccggggtggaccgcgactttatcaaaaaccagcggtc
acgcgagaaggtcgcgtacatcatcgggaattgatgtgtcgcatctatgacggtaaagaa
gaggtgagctcggcggagtatatgccgatggtgctgcaatttggtttatcggaagagtat
gacagattacaaattagccgcctgattacgttgctgggctactggccggatgaaaatctg
gcaatgcagttgacggttgagtcgctgattcgtccgcgttttcagcgctggttgcgcgat
acgttaatgcagtgtgaaaaatcacagcgaaatcgcataattattgaacttgcggaggca
gatgtttgtcaacacatcagtcggttacaacccatccttcgcttagtcaatgcgcttggc
gttcgggtggcggtgacacaggcgggtttgacgctggttagcacgagctggattaaagcg
ctcaatgtggaattactcaagctgcatccgagtctggtcagaaacattgagaagcgaacg
gaaaaccagcttctggttcaaagtctggtagaggcctgcgcgggcacgcctacgcaggtt
tacgcgacaggcgtccgttcgcgcggcgagtggcagacgctgacaaaacgcggcgtggct
ggcgggcagggtgatttttttgcctcctcccaactacttgacacaaacgtgaaaaaatat
tcgcaaagatactcggtttaa
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