Salmonella enterica subsp. enterica serovar Typhimurium DT104: DT104_39431
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Entry
DT104_39431 CDS
T02874
Symbol
rffA
Name
(GenBank) lipopolysaccharide biosynthesis protein
KO
K02805
dTDP-4-amino-4,6-dideoxygalactose transaminase [EC:
2.6.1.59
]
Organism
send
Salmonella enterica subsp. enterica serovar Typhimurium DT104
Pathway
send00541
O-Antigen nucleotide sugar biosynthesis
send01100
Metabolic pathways
send01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
send00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
DT104_39431 (rffA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
send01007
]
DT104_39431 (rffA)
Enzymes [BR:
send01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.59 dTDP-4-amino-4,6-dideoxygalactose transaminase
DT104_39431 (rffA)
Amino acid related enzymes [BR:
send01007
]
Aminotransferase (transaminase)
Others
DT104_39431 (rffA)
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Gene cluster
GFIT
Motif
Pfam:
DegT_DnrJ_EryC1
Aminotran_1_2
Aminotran_5
OKR_DC_1
Beta_elim_lyase
GCD14
Motif
Other DBs
NCBI-ProteinID:
CCW76641
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Position
4209969..4211099
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AA seq
376 aa
AA seq
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MIPFNAPPVVGTELEYMQSAMSSGKLCGDGGFTRRCQQWLEQHFGSAKVLLTPSCTASLE
MAALLLDIQPGDEVIMPSFTFVSTANAFVLRGAKIVFVDIRPDTMNIDETLIEAAITDKT
RAIVPVHYAGVACEMDVIMALADKYNLFVVEDAAQGVMSTYKGRALGTIGHIGCFSFHET
KNYTAGGEGGATLINDRTLIERAEIIREKGTNRSQFFRGQVDKYTWRDIGSSYLMSDLQA
AYLWAQLEAADRINQQRLSLWQTYYDALTPLARAGRFELPSIPENCGHNAHMFYIKLRDI
ADRSALINFLKEAEIMAVFHYIPLHDCPAGDKFGEFIGDDVYTTKESERLLRLPLFYNLA
PVDQRTVITTLLNYFS
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atgattccttttaatgcgccgccggtggtgggaaccgaactcgaatacatgcagtctgca
atgagcagcggcaaactgtgcggcgacggcggctttacgcgtcgttgccagcagtggctg
gagcaacatttcggcagcgcgaaggtgttgctaacgccttcctgtaccgcatcgctggag
atggcggctctgttgttggatattcagcccggcgatgaagtgatcatgccgagctttacg
tttgtctccaccgctaacgcttttgtcctgcgcggcgcgaaaattgtgtttgtcgatatt
cgtccggatacgatgaatattgacgaaacgctgattgaggcggcgattactgataaaacc
cgcgctatcgtgccggtacactacgctggcgtcgcttgtgaaatggacgtcatcatggcg
ctggcggataagtataatctgttcgttgtcgaggatgccgcccagggtgtgatgtccacg
tacaaagggcgcgcattagggacgatcggtcacatcggctgttttagcttccatgaaacc
aaaaattacaccgctggcggcgaaggcggcgcgacgctgatcaacgatcgtacgctaatt
gaacgcgcggagatcatccgcgaaaaaggcaccaaccgtagccagttcttccgtggtcag
gtggataaatacacctggcgggatatcggctccagttatttgatgtccgatctgcaggct
gcctatctgtgggcgcaactggaggccgccgatcgtatcaatcaacagcgtctgtcgctg
tggcagacttactacgatgcgttaacgccgctggcgcgcgccgggcgtttcgagctgcct
tctattccggaaaactgcgggcataatgcccatatgttttacatcaaactgcgggatatc
gccgatcgcagcgcgctgattaatttcctgaaagaggcggaaatcatggcggtattccat
tacattccgctgcatgattgtccggcgggcgataaattcggcgagtttatcggggacgat
gtctacaccacaaaagagagcgaacgtttgttgcgtctgccgctgttttataaccttgcg
cccgtcgatcaacgaacggtgattactaccttgctaaattatttctcctga
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