Salmonella enterica subsp. enterica serovar Thompson: IA1_01860
Help
Entry
IA1_01860 CDS
T02868
Name
(GenBank) rtn protein
KO
K26148
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
sene
Salmonella enterica subsp. enterica serovar Thompson
Brite
KEGG Orthology (KO) [BR:
sene00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
IA1_01860
Enzymes [BR:
sene01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
IA1_01860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
CSS-motif
Motif
Other DBs
NCBI-ProteinID:
AGX12945
LinkDB
All DBs
Position
410479..412029
Genome browser
AA seq
516 aa
AA seq
DB search
MLFIAVPLIVMILVGLLAGIFQLKRDIAVSANTLLRFSADISAASWQVAGKAARLAESSC
TDTLKELSRTRAFTPYVRDIGFLENGDITCSFVTGTERYHFSRLAGLSLPASYPERWLRS
IGSMAEGPDRLVVVYVKKVAANKAAFVIVDSQYVQELMEILAAERASAFSLTFGAGEAIT
SAATLRGKAFLTQRFTSTDHTIQLMVRTPFSTLSAYWLQNLFIFVPLSLCLSVGMMLFYR
RWYLKRLSLAREIARGITHNEFTVHYQPVFNVKHASCGGVEALMRWPQPDGRFITPDIFI
TAAENEGMIIPLSRHLFELIAHDVINWTVPDDFYISVNISPAHLMDDGFIQDIEALRTRL
GTITLMLELTERSLIVEPSQVAEKLSTLREKGVLIAIDDFGTGYCSLSYLQQLPVDSLKI
DRTFIDTIDTSSNDVPVLDTIITLSQRLGLNVVAEGVSTQHQLRYILSHGVGFVQGFLYA
RPMGTNDFMSWLGKSAQRQNGLLKGENESASGLVAE
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgttgtttattgccgttccactgatcgtaatgatattggtggggttactcgcgggtatc
ttccagctaaaacgagatatcgccgtcagcgccaatacgctgctgcggtttagcgcggat
atatctgccgcctcctggcaagtcgccggaaaagccgccagactggctgagagttcctgc
actgatacgctgaaagaactgtccagaacgcgggccttcactccttatgtacgtgacatt
gggtttctggaaaatggtgatatcacttgctcctttgtcacaggaaccgaacgctatcat
ttttcccggctggcagggctttccttacctgcttcttatccggaacggtggttgcgatct
atcggtagtatggccgaaggacccgatcgccttgttgtggtttatgtgaaaaaagtagca
gcgaataaagcggctttcgtcattgtggattcgcagtatgtccaggagctcatggagata
ttggcagcagagagagcatcagcctttagcctgacattcggcgcaggggaggcgattacc
agcgctgcgacgttgcgcggtaaggcgtttttaacgcagcgcttcacctcaaccgatcac
actatccagctgatggtgcgaacccctttctcaacgttatcggcatactggttacaaaac
ctttttatttttgttccgctgtcattgtgtctttctgtagggatgatgttgttctacagg
cgctggtatttaaaacgtttatctctggcccgggagattgccagggggataacgcacaat
gagtttacggtacattatcaacctgtttttaacgttaaacacgctagttgcggcggcgtg
gaggcgctaatgcgctggccgcaaccggatggccgttttataactcccgatatttttatt
accgccgcagaaaatgaaggcatgattattcctctctctcgtcatctgttcgaactgatt
gctcatgacgtgataaactggactgtaccggatgatttctatatcagcgtaaatatatcg
cctgcgcatcttatggatgacggttttatacaagatatagaggcgctcaggactcgtttg
ggaacgataacgcttatgttggagctcaccgagcgtagcctgattgtagaaccttcacag
gtcgcagaaaaactttcaacgctccgtgaaaaaggcgtgttaatagcgattgatgatttt
gggaccggctattgctcactctcctatctccaacaattacctgtagactctcttaaaata
gacagaacgtttatcgataccattgataccagcagcaatgatgttcctgtcctggatact
atcattacgctgagtcagcgactgggactcaatgtggttgccgaaggggtcagtacccag
caccaattgcgttacatcttaagccacggggtaggattcgttcagggatttctttatgcc
aggccgatggggactaatgactttatgagttggcttggcaagtcagcccagcggcaaaat
ggtttgctcaagggggaaaacgaatctgcgagtggcctggtggctgaataa
DBGET
integrated database retrieval system
