Salmonella enterica subsp. enterica serovar Thompson: IA1_02875
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Entry
IA1_02875 CDS
T02868
Name
(GenBank) outer membrane usher protein FimD
KO
K07354
outer membrane usher protein
Organism
sene
Salmonella enterica subsp. enterica serovar Thompson
Brite
KEGG Orthology (KO) [BR:
sene00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
sene02035
]
IA1_02875
Bacterial motility proteins [BR:
sene02035
]
Pilus system
Fimbrial proteins
IA1_02875
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Usher
PapC_N
PapC_C
Motif
Other DBs
NCBI-ProteinID:
AGX09796
LinkDB
All DBs
Position
629658..632270
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AA seq
870 aa
AA seq
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MKKTTWFAGRFPGYVSPLSGVALSVLAALCPLTSRGESYFNPAFLSADTASVADLSRFEK
GNHQPPGIYRVDIWRNDEFVATQDIRFEAGAVGAGDKSGGLMPCFTPEWIKRLGVNTAAF
LVSDKGVDTTCIHLPEKIPGAEVAFDFASMRLNISLPQASLLNSARGYIPPEEWDEGIPA
ALINYSFTGSRGTDSDSYFLSLLSGLNYGPWRLRNNGAWNYSKGDGYHSQRWNNIGTWVQ
RAIIPLKSELVMGDSNTGNDVFDSVGFRGARLYSSDNMYPDSLQGYAPTVRGIARTAAKL
TIRQNGYVIYQSYVSPGAFAITDLNPTSSSGDLEVTVDEKDGSQQRYTVPYSTVPLLQRE
GRVKYDLVAGDFRSGNSQQSSPFFFQGTVIAGLPAGLTAYGGTQLADRYRAVVVGAGRNL
GDWGAVSVDVTHARSQLADDSTHQGQSLRFLYAKSLNNYGTNFQLLGYRYSTRGFYTLDD
VAYRSMEGYDYEYDSDGRRHKVPVAQSYHNLRYSKKGRFQVNISQNLGDYGSLYLSGSQQ
NYWNTADTNTWYQLGYASGWQGISYSLSWSWNESVGISGADRILAFNMSVPFSVLTGRRY
ARDTILDRTYATFNANRNRDGDNSWQTGVGGTLLEGRNLSYSVTQGRSSSNGYSGSASAS
WQATYGTLGVGYNYDRDQHDYNWQLSGGVVGHADGITFSQPLGDTNVLIKAPGAKGVRIE
NQTGVKTDWRGYAVMPYATVYRYNRVALDTNTMDNHTDVENNVSSVVPTEGALVRAAFDT
RIGVRAIITARLGGRPLPFGAIVRETASGITSMVGDDGQIYLSGLPLKGELFIQWGEGKN
ARCIAPYALAEDSLKQAITIASATCIRPAS
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagacaacctggtttgcagggcgatttcccggctatgtatcaccgttaagcggc
gtggcgctgtcggtgctggcggcgctgtgtccgctgacgagccgcggcgaaagttatttc
aaccctgcgtttttgtcggcggataccgcgtccgtggcggatttatctcgctttgaaaaa
ggtaatcatcagcctcccggtatttaccgggtggatatctggcgtaacgacgaattcgta
gcgacgcaggatattcgttttgaggcgggcgccgtgggcgccggcgataaatccggcggc
ctgatgccttgttttacaccggagtggattaaacggctgggcgtgaataccgcggcgttc
cttgtctcagataaaggcgtcgataccacgtgtattcaccttcctgagaaaatcccgggc
gcggaggtcgcgttcgatttcgcttcgatgcgcttaaatattagcttgccgcaggcgtca
ttgctcaacagcgcgcgtggctatatcccgccggaagagtgggatgaagggatacccgcc
gcactcattaattacagttttaccggtagccgcggaacagacagcgatagctattttttg
agtctgctgagcgggttgaactatggcccctggcggctgcgtaataacggagcctggaat
tattcgaaaggggatggctatcattcgcaacgctggaacaacattggcacctgggtacag
cgcgccatcattccgctaaaaagcgaactggtcatgggggacagcaataccgggaacgat
gttttcgacagcgtcggctttcgcggagcgcggctgtactcttctgacaatatgtatccc
gatagcctgcagggctacgcccccacggttagaggaatcgcccggacggcggcaaagctg
acgatacgacagaacgggtatgttatctaccaaagctatgtgtcgccgggtgcgtttgcg
attaccgatcttaatcctacctcttccagcggcgaccttgaggtgacggtagatgaaaaa
gacggtagccaacaacgttacacggtgccttactctaccgttccgctattgcagcgtgag
ggcagggtgaagtatgacctggtggccggggattttcgcagcggcaatagtcagcagtct
tcgccattctttttccagggaacggtgattgccggcctgcctgcggggctgacggcttac
ggcggtacgcaacttgccgatcgttaccgtgccgtggtggtcggggcggggcgaaatttg
ggcgactggggtgccgtgtcggtcgatgtcacacatgcgcgtagccaactggcagatgac
agcacccatcaggggcaatcgttgcgttttctgtacgccaaatcgctgaataattacggg
actaattttcaattgctgggttaccgctattccacgcgcggattttacaccctggatgat
gtggcataccgcagtatggaagggtacgactacgaatacgatagcgacggacgccgccat
aaagtgccggtggcgcagagctaccacaatctccgttacagcaaaaaaggccgctttcag
gtcaatatttcgcaaaacttgggggattacgggtcactgtatctttccggcagtcaacaa
aattactggaatacggcggataccaatacctggtatcaactgggatacgccagtggatgg
caaggcataagttattcgctgtcatggtcgtggaacgagtcggtggggatctcaggcgcc
gatcgcattctggcattcaatatgtccgttccgtttagcgttctgaccggacggcgctat
gcgcgcgacactattcttgatcgtacttatgccacgtttaacgccaaccgcaaccgcgac
ggcgacaatagctggcagaccggcgtgggcggcacgcttctggaaggacgtaatctgagc
tacagcgtgacgcaagggcgtagcagtagcaatggttatagcggcagcgccagcgctagc
tggcaggcgacgtatggcacgctgggcgtgggatataactacgatcgcgatcagcatgac
tataactggcaactttccggcggcgtggtcggtcatgcggatggtattacgtttagccaa
ccgttgggcgataccaatgtcttgattaaagcgccgggagcgaaaggcgtgcgcatcgaa
aaccagaccggcgtgaaaacggactggcggggctatgcggtaatgccctatgccacggta
tatcgctataaccgcgtcgcgttagataccaacacgatggacaaccataccgatgtcgaa
aataacgtcagcagcgtagtgccgacagagggcgcgctggtgcgggctgcttttgatacg
cggataggcgtaagggcaatcattaccgcgaggcttggcggacgtccgttaccgtttggc
gcgatagtacgagaaaccgccagcggcattaccagtatggtcggcgatgacgggcaaatt
tatctgagcggcttgccgctaaaaggtgaactgttcatccagtggggagaggggaaaaac
gcgcgttgtatcgccccttacgctctggcggaggatagcctgaagcaggcgattacgata
gccagtgcgacctgtatccgtccggcgtcataa
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