Salmonella enterica subsp. enterica serovar Thompson: IA1_09885
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Entry
IA1_09885 CDS
T02868
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
sene
Salmonella enterica subsp. enterica serovar Thompson
Brite
KEGG Orthology (KO) [BR:
sene00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sene03400
]
IA1_09885
DNA repair and recombination proteins [BR:
sene03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
IA1_09885
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
Motif
Other DBs
NCBI-ProteinID:
AGX10910
LinkDB
All DBs
Position
complement(2038129..2038599)
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AA seq
156 aa
AA seq
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MADVHDKATRSKNMRAIATRDTAIEKRLAGLLSAQGITFHTQDATLPGKPDFVVNDYDCV
IFTHGCFWHHHHCYLFKVPATRTAFWLEKIGKNVERDERDIQRLQALGWRVLIVWECALR
GRAKLSDAALAERLEEWICGGGASAQIDTQGIHLLA
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgttcacgataaagccacgcgcagtaaaaatatgcgcgcgatagcgacccgc
gatacggctattgaaaaacgtcttgccggcctgctaagcgcgcaggggattacgtttcat
actcaggacgcgacattaccgggcaagccggactttgtggtgaatgactatgattgtgtg
atttttactcacggctgcttttggcatcatcaccactgttatctgttcaaagtaccggcc
acgcgaacggctttctggctggaaaaaatcggtaagaacgttgagcgcgatgagcgcgat
attcagcgtttacaggcgcttggctggcgggtgctgatcgtctgggagtgcgccttgcgc
gggcgagcgaaattgagcgacgcggcgttggcggagcgcctggaagagtggatctgcggc
ggcggcgccagcgcgcagatcgacacccaggggattcatctactggcgtga
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