Salmonella enterica subsp. enterica serovar Thompson: IA1_12550
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Entry
IA1_12550 CDS
T02868
Name
(GenBank) AIDA autotransporter
Organism
sene
Salmonella enterica subsp. enterica serovar Thompson
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Paralog
Gene cluster
GFIT
Motif
Pfam:
PATR
Autotransporter
AC_1
Motif
Other DBs
NCBI-ProteinID:
AGX13327
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All DBs
Position
complement(2589591..2595629)
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AA seq
2012 aa
AA seq
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MYVVASELARGHSKVKAQVCASEIHSPNQKSEYGQIIKATRAALACAVAAALGFFSPLAM
ADNQVSYADAQPHVLDASTPPMSYSGTDEGSALYVSGVATVGWQPTTVTGTGLVIETSGG
GADDPDGGKYVSNAISLDHYAILELTDAKITTTGIYTQGISAADGSKLTLTDSTLTIDGN
FGVMTLYTGSEATLDGTIVEAANSSSAQVQQGSTLNVLDGSTITLAQGQINVVAGNTATD
EGSTLNLSDSSVSSAGTMSTIQGTNKAALNLTNATITHTNASGAAVQANNATTLDISGGN
ITSAGMGVYILASDARIDGATINADGDGIFITSKKRSTSYEDLNALTVSDANVTSKTVAL
NIDGSTTINDPIELTNSTFTAPTAIKLGSKATIQAEKTMLTGNIVQTDASSSSLSLSQGS
TLTGSVDAMFTTLSLDDTSQWNMTDPSTVGNLTNDGDITLGNASGSTGTLLTVDNTLTLQ
DCSQINATLDTANSSPIIKAANVTLDGTLNLSSTATFVAPETDEHFGSITLIDSQTAITT
DFDSVTLDADTSAMPDYLTINAGVDANDNTNYELSTGLSWYAGAKSARAAHGTFTVDAGS
TFTVTSELDETTATSNWNGSKLTKQGDGTLILSNTGNDYGDTEIDGGILAAKDAAALGTG
DVTIAESATLALSQGTLDNNVTGEGQIVKSGSDELIVTGDNNYSGGTTISGGTLTADHAD
SLGSGDIDNSGVLKVGEGELENILSGSGSLVKTGTGELTLSGDNSYSGGTTITGGTLTAD
HADSLGSGDIDNSGVLKVGEGDLENTLSGSGSLVKTGTGELTLSGGNDYSGGTTIIGGTL
TADHADSLGSGDIDNSGVLQVGEGELENTLSGSGSLVKTGTGELTLSGGNDYSGGTTIXG
GTLTADHADSLGSGDIDNSGVLQVGEGELKNTLFGSGSLVKTGTGELTLNGDNDYSGGTT
IDDGVLIADNADLLGTGAVANNGVLQVGEGELKNTLSGTGSLVKIGTGELTLNGDNDYSG
GTTISGGTLIAANVNALGSGDIDNSGTLILDANGAFELANVTTHSGATTALAAGSTLDAG
QFTQEDGSTLSIDLGAATDDAVITADSVALGGTLNVTGIGSVTDSWTPEAYTYTLIGSDS
AITTDFDDLTVAGMNREDVDFLTIDGKVDEADNTHYDLTASLSWYADRDNATTNAHGTFT
LSDPDGGFNVAATLTDVDDTLDPGSRWDGKSLTKEGAGTLILSGDNDYSGGTTINEGTLV
AASTTALGTGLVDNNATLVLDVDGEVSAVGGITTHSGATTQLALGTSLDLGDSALIQQDG
STLNVELNSDSVQPLITGGSATLGGDLVVSDASLQARASDAEFQSFKLMDMDSDISGDFT
SLTMNLTDQPDYLTVTGTINPADASEYLLTEGLSWNATATSATPAHGTFTLSAGDSFEVT
SVLGDKTGNGDWDGKSLTKLGAGKLTLSGANTYSGDTNVQEGTLWLTGAGTIGEVGSQQA
VNVASDATFGGSNGTTVNGKVTNEGTLVFGDSEETGAIFTLNGDLINMGTITSGSSSSTP
GNTLYVDGDYTGNGGSLYLNTVLGDDDSATDKLVITGDASGTTDLYINGIGDGAQTTNGI
EVVDVGGVSTSDAFVLKNEVNASLYTYRLYWNESDNDWYLASKAQSDDDDSGGDDTPSDG
GGDGGDVTPPDDGGDVAPQYRADIGAYMGNQWMARNLQMQTLYDREGSQYRNADGSVWAR
FKAGKAESEAVSGNIDMDSNYSQFQLGGDILAWGNGQQSVTVGVMASYINADTDSTGNRG
ADGSQFTSSGNVDGYNLGVYATWFADAQTHSGAYVDSWYQYGFYNNSVESGDAGSESYDS
TANAVSLETGYRYDIALSNGNTVSLTPQAQVVWQNYSADSVKDNYGTRIDGQDGDSWTTR
LGLRVDGKLYKGSRTVIQPFAEANWLHTSDDVSVSFDDATVKQDLPANRAELKVGLQADI
DKQWSVRAQVAGQTGSNDFGDLNGSLNLRYNW
NT seq
6039 nt
NT seq
+upstream
nt +downstream
nt
atgtatgtcgtggcttcagaattggcgcgaggccacagcaaagttaaagcgcaagtatgc
gcgagtgaaatccattctccaaaccaaaagtccgaatatggacaaataataaaagcaacg
cgcgcggcgctggcttgcgccgtggctgcggcactcggatttttcagcccgctggctatg
gccgataatcaggtatcatatgctgatgcgcagccccacgttctggatgcgtcaacgccg
ccgatgagctattcgggcaccgatgaaggctcggcgctatatgtctcgggtgtcgccacc
gtcggctggcagcccaccacggtcacagggactgggctcgtcattgaaacaagcggaggc
ggggctgatgatccggatggcggtaagtatgtttccaacgccatttcgctggatcattac
gctatccttgagcttaccgacgcgaagataaccactacgggtatttatacccagggtatt
tccgcagcggatggcagcaaactgacgttaacagacagtacgctaacgattgacggcaat
ttcggcgtaatgacgttgtatacgggttcagaagcaacgctggacggtaccatcgttgag
gcagctaacagcagcagcgcgcaggtgcaacaaggcagtacgctgaacgtgctggacggt
agcacaatcaccctggcgcaaggccagataaacgttgttgccggaaacaccgcgacagac
gagggttccaccctgaacctgtctgatagctcggtcagctctgcaggtacgatgagcacc
atccagggtaccaataaggccgctcttaatctcaccaacgcgaccataacacataccaat
gccagcggcgcggcggtacaggccaataacgccactaccctggatatttcaggcggcaac
attacctctgccggtatgggcgtgtatattctggcgtcggacgccaggatcgacggcgcc
accatcaacgccgacggcgacggtatctttatcaccagtaaaaagagaagcacctcgtat
gaggatctcaacgcgctcacggtcagcgacgcaaacgtcacctcaaaaactgtcgcactg
aacattgatggcagcacgaccattaacgaccccattgagctcaccaacagcacctttacg
gcgccgaccgcgatcaaattaggcagcaaagcgactattcaggccgaaaaaacgatgctg
accggcaacattgtccagactgacgcgtcatcgtcatcgctctctttaagccaggggtcc
acgttaaccggtagtgtagatgcgatgtttactacgctgtcgctcgacgacaccagccag
tggaacatgaccgacccgtcaaccgtcggcaatctgaccaacgacggcgatattacgctg
ggcaacgcgagcggttcgacaggtacgctgctgacggtggacaataccctgaccttgcag
gactgcagccagataaacgcgacgctggataccgccaacagctcgccaattatcaaagcc
gccaacgtcacgctggacgggacgctgaaccttagctcaacggccacctttgtcgcgccc
gaaaccgacgaacactttggatcgatcacgctgattgattcgcaaactgcgatcactacc
gattttgacagcgtaacgctggatgccgacacctccgctatgccggattaccttacgatc
aacgcgggcgttgatgcgaatgataataccaactacgagctgtctacgggcttgagttgg
tacgcgggcgcaaaatctgcgcgcgctgcgcatggcacttttaccgttgatgcaggcagt
acctttaccgtcaccagcgaactggacgaaaccacggcgacctccaactggaacggcagc
aagctaaccaaacaaggcgacggcacgctgatcctcagcaacaccggcaacgactacggc
gatactgaaattgacggcggcattctggccgccaaagacgccgccgcgctcggcactggc
gatgtgacgattgcagaaagcgcaacgcttgcgctgagccagggcacgctggataacaac
gtgaccggcgagggccaaattgtcaaaagcggtagcgatgagctgatcgtgaccggcgat
aacaactacagcggcggcaccactatttccggcggtacgctgacggctgaccatgcggat
tcgctgggcagcggcgatatcgacaacagcggcgtgcttaaggtgggcgaaggcgagctg
gaaaacatcctttccggcagcggctcgctggtgaaaaccggtaccggcgagctgacgtta
agcggcgacaacagctacagtggcggcaccaccattaccggcggtacgctgacggctgac
catgcggattcgctgggcagcggcgatatcgataacagcggcgtgcttaaggtgggcgaa
ggcgatctggaaaatacgctttccggcagcggttcgctggtgaaaaccggtaccggcgag
ctgacgttaagcggcggcaacgattactccggcggcaccaccattatcggcggtacgctg
acggctgaccatgcggattcgctgggcagcggtgatatcgacaacagcggcgtgcttcag
gtcggcgagggcgagctggaaaatacgctttccggcagcggctcgctggtgaaaaccggt
accggcgagctgacgttaagcggcggcaacgattactccggcggcaccaccattaycggc
ggtacgctgacggctgaccatgcggattcgctgggcagcggtgatatcgacaacagcggc
gtgcttcaggtcggcgagggcgagctgaaaaatacacttttcggcagcggctcgctggtg
aaaaccggtacgggcgaactgacgttaaacggcgataacgattactccggcggcaccacc
attgacgacggtgtgctgattgctgacaatgcggatttactggggaccggagctgttgcc
aacaacggcgtgcttcaggtcggcgagggcgagctgaaaaatacgctttccggcaccggt
tcgctggtgaaaatcggcacgggcgagctgacgttaaacggcgataacgattactccggc
ggcaccactatttccggcggtacgctgattgccgccaacgtcaacgcgctgggcagcggc
gatatcgacaacagcggtacgctgatactggatgccaacggcgcatttgagcttgcgaac
gtcaccacccatagcggcgccactaccgcgctggcagcgggcagcacccttgacgcgggc
cagttcacccaggaagacggcagtacgctaagtattgacctcggcgcggccaccgacgac
gccgtgattaccgccgacagcgtcgcgctgggcggcacgctgaatgttaccggcattggc
agcgttacagacagctggacgcctgaggcatacacctacacgctgattggcagcgacagc
gccattacgaccgatttcgacgatctgaccgtcgcgggaatgaatagagaagatgttgac
ttcctgactatcgacggaaaagtcgatgaagcagacaacacccactatgatctgacggcc
tccctctcctggtatgcggacagagacaacgccactaccaacgcccacggcacctttacc
ctgagcgaccctgacggcggctttaacgttgcggctacactgacagacgttgatgacacg
ctggatccgggtagcagatgggacggtaaatcgctgaccaaagaaggcgcaggcacgctg
atcctctccggcgacaacgactacagcggcggcaccaccatcaatgaaggtacgctggtc
gccgccagtacgacggcgctgggcaccggtctggtagacaataacgccacgctggtgctg
gacgtagacggtgaagtcagcgcggtgggcggcatcaccactcatagcggcgcgacgacc
caactggcgctcggcacctcgttggatctcggcgacagcgcgttaattcagcaagatggc
agtacgctgaacgttgagctgaatagtgactcagtgcaaccgctgatcaccggcggcagc
gccacgcttggcggcgatttggtcgtcagcgacgccagcctgcaagcgcgcgcctccgac
gcggagttccagtcctttaaactgatggatatggacagcgatatcagcggcgactttacc
agcctgacgatgaacctcactgaccagccggactatctgaccgtaaccgggacaatcaat
cctgcagatgcgtcagaatatttgcttactgaagggctgagctggaatgcgaccgccacg
tcagcgacgccagcacacggcacgtttaccctgagcgcaggcgacagttttgaagtcacc
agcgtactgggcgataaaaccggcaacggcgactgggacggtaaatcgctgaccaaactg
ggcgcgggtaaactgacgctgagcggcgcgaacacctatagcggcgataccaacgtacag
gaaggcacgctgtggctgaccggcgccggcacgattggcgaagtgggcagccagcaggcg
gtgaacgtcgcttccgacgcgacctttggcggcagcaacggtacaaccgttaacggtaag
gtgaccaatgaagggacgctggtcttcggcgacagcgaggagacaggcgctatcttcacc
ctcaatggcgatctgatcaacatggggacaataaccagtggcagcagctccagcacgccg
ggcaatacgctttatgttgacggcgattataccggtaacggcggctcgctttacctgaat
accgtcctgggcgacgatgattcggcgaccgataagttagtcattaccggcgatgcctcc
ggcaccaccgatctgtacatcaacggcatcggcgatggagcacagaccactaacggtatt
gaagtggtggatgttggcggcgtatcgaccagcgatgcgtttgtgttaaaaaatgaagtt
aacgccagtctgtatacctaccgtctgtactggaatgaaagtgacaacgactggtatctg
gcgtcaaaagcacagtctgatgatgacgacagcggcggtgatgacacgccttcggatggc
ggcggcgacggcggcgatgtcacgcctccggacgatggcggcgatgtcgcaccgcagtac
cgtgcggatatcggcgcgtacatgggcaaccagtggatggcgcgcaacctgcaaatgcag
accctctatgaccgcgagggcagccagtatcgtaatgccgatggcagcgtatgggcgcgc
ttcaaagcgggtaaagcggaatccgaggctgtcagcggcaatatcgatatggacagcaac
tactcccagttccagttaggcggcgacattctggcctggggcaacggccagcagagcgtt
accgttggcgtcatggcgagctacatcaacgccgacaccgacagcaccggtaaccgtggc
gcggacggtagccagttcaccagtagcggcaacgtagacggctacaacctcggcgtctat
gccacctggtttgccgatgcccaaacgcatagcggcgcgtatgtcgatagctggtatcaa
tacggtttctacaacaacagcgtagagagcggtgatgcgggatctgaatcttacgattca
accgctaacgccgtctcgctggaaaccggttatcgctacgatattgcgcttagcaacggt
aatactgtcagtctgacgccgcaggcgcaggttgtctggcagaattactcagcggatagc
gtgaaggataactacggcacccggatcgatggtcaggatggcgacagttggacaacgcgt
ctgggtctgcgtgttgacggcaagctgtacaaaggcagccgtacggttatccagccgttt
gctgaagctaactggctgcacaccagcgatgatgtgtcggtatcgtttgatgatgctacg
gtgaaacaggatcttccggctaaccgtgcggagctgaaagtgggtctgcaggcagatatc
gataagcagtggagcgttcgcgctcaggttgccgggcagactggcagcaatgactttggc
gatctgaacggtagcctcaatctgcgctataactggtaa
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integrated database retrieval system
