Salmonella enterica subsp. enterica serovar Thompson: IA1_12775
Help
Entry
IA1_12775 CDS
T02868
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
sene
Salmonella enterica subsp. enterica serovar Thompson
Pathway
sene00260
Glycine, serine and threonine metabolism
sene00460
Cyanoamino acid metabolism
sene00630
Glyoxylate and dicarboxylate metabolism
sene00670
One carbon pool by folate
sene00680
Methane metabolism
sene01100
Metabolic pathways
sene01110
Biosynthesis of secondary metabolites
sene01120
Microbial metabolism in diverse environments
sene01200
Carbon metabolism
sene01230
Biosynthesis of amino acids
sene01240
Biosynthesis of cofactors
sene04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
sene00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
IA1_12775 (glyA)
09102 Energy metabolism
00680 Methane metabolism
IA1_12775 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
IA1_12775 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
IA1_12775 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
IA1_12775 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
IA1_12775 (glyA)
Enzymes [BR:
sene01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
IA1_12775 (glyA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
OKR_DC_1
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
AGX11362
LinkDB
All DBs
Position
complement(2655417..2656670)
Genome browser
AA seq
417 aa
AA seq
DB search
MLKREMNIADYDAELWQAMEQEKVRQEEHIELIASENYTSPRVMQAQGSQLTNKYAEGYP
GKRYYGGCEYVDVVEQLAIDRAKELFGADYANVQPHSGSQANFAVYTALLQPGDTVLGMN
LAQGGHLTHGSPVNFSGKLYNIVPYGIDESGKIDYDEMAKLAKEHKPKMIIGGFSAYSGV
VDWAKMREIADSIGAYLFVDMAHVAGLIAAGVYPNPVPHAHVVTTTTHKTLAGPRGGLIL
AKGGDEELYKKLNSAVFPSAQGGPLMHVIAGKAVALKEAMEPEFKVYQQQVAKNAKAMVE
VFLNRGYKVVSGGTENHLFLLDLVDKNLTGKEADAALGRANITVNKNSVPNDPKSPFVTS
GIRIGSPAVTRRGFKEAEVKELAGWMCDVLDNINDEATIERVKAKVLDICARFPVYA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttaaagcgtgaaatgaacattgccgattatgatgccgaattgtggcaggctatggag
caggaaaaagtacgtcaggaagagcacatcgaactgatcgcctccgaaaactacaccagc
ccgcgcgtgatgcaggcgcaggggtctcagctgaccaacaaatacgctgaaggttatccg
ggcaagcgctactacggcggttgcgaatacgttgatgtcgtagagcaactggctatcgac
cgcgcgaaagaactgttcggcgccgactacgctaacgtgcagccgcactccggttctcag
gctaacttcgctgtttacaccgcgctgctgcagccgggcgataccgttctgggtatgaac
ctggcgcagggcggccacctgactcacggctccccggttaacttctccggtaaactgtac
aacatcgtaccttacggaatcgatgagtccggtaaaattgactatgacgagatggcgaag
ctggccaaagagcacaagccgaagatgattatcggtggcttctctgcctactccggcgtg
gttgactgggcaaaaatgcgtgaaatcgctgacagcatcggcgcatacctgtttgtcgac
atggcgcacgtggcgggcctgattgccgcaggcgtttacccgaacccggttccccatgct
cacgttgtcaccaccaccacccacaaaaccctggcgggtccgcgcggcggcctgatcctg
gcgaagggcggcgatgaagagctgtacaaaaaactgaactccgccgtgttcccaagcgcg
cagggcggcccgctgatgcacgtgatcgcgggtaaagcggtagcactgaaagaagcgatg
gagccggagttcaaagtttaccagcagcaggtggcgaaaaacgccaaagcgatggtggaa
gtgttcctgaaccgcggctacaaagtggtgtctggcggcactgagaaccacctgttcctg
ctggacctggtggataaaaacctgaccggtaaagaagctgacgccgcgctgggccgtgct
aacatcaccgtgaacaaaaacagcgtgccgaacgatcctaagagcccgttcgtgacttcc
ggtatccgcatcggttctccagcggtcactcgtcgcggcttcaaagaagcggaagtgaaa
gagctggctggctggatgtgtgacgtgctggacaacatcaatgatgaagccaccattgaa
cgcgtgaaagcgaaagtactggatatctgcgcccgcttcccggtttacgcgtaa
DBGET
integrated database retrieval system
