Salmonella enterica subsp. enterica serovar Thompson: IA1_12795
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Entry
IA1_12795 CDS
T02868
Name
(GenBank) lysine decarboxylase CadA
KO
K01582
lysine decarboxylase [EC:
4.1.1.18
]
Organism
sene
Salmonella enterica subsp. enterica serovar Thompson
Pathway
sene00310
Lysine degradation
sene01100
Metabolic pathways
sene01110
Biosynthesis of secondary metabolites
sene01120
Microbial metabolism in diverse environments
Module
sene_M00956
Lysine degradation, bacteria, L-lysine => succinate
Brite
KEGG Orthology (KO) [BR:
sene00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
IA1_12795
Enzymes [BR:
sene01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.18 lysine decarboxylase
IA1_12795
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
DUF6348
Motif
Other DBs
NCBI-ProteinID:
AGX11366
LinkDB
All DBs
Position
2661686..2663830
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AA seq
714 aa
AA seq
DB search
MNVIAIMNHMGVYFKEEPIRELHRALEGLNFRIVYPNDREDLLKLIENNSRLCGVIFDWD
KYNLELCEEISKLNEYMPLYAFANSYSTLDVSLNDLRMQVRFFEYALGAAADIAAKIRQN
TDEYIDNILPPLTKALFKYVREGKYTFCTPGHMGGTAFQKSPVGSIFYDFFGPNTMKSDI
SISVSELGSLLDHSGPHKEAEEYIARVFNAERSYMVTNGTSTANKIVGMYSAPAGSTVLI
DRNCHKSLTHLMMMSDITPIYFRPTRNAYGILGGIPQSEFQHATIAKRVKETPNATWPVH
AVITNSTYDGLLYNTDYIKKTLDVKSIHFDSAWVPYTNFSPIYQGKCGMSGDRVEGKIIY
ETQSTHKLLAAFSQASMIHVKGDINEETFNEAYMMHTTTSPHYGIVASTETAAAMMKGNA
GKRLINGSIERAIKFRKEIKRLKSESDGWFFDVWQPEHIDGAECWPLRSDSAWHGFKNID
NEHMYLDPIKVTILTPGMKKDGTMDEFGIPASLVAKYLDERGIIVEKTGPYNLLFLFSIG
IDKTKALSLLRALTEFKRAFDLNLRVKNILPALYREAPEFYENMRIQELAQNIHKLVEHH
NLPDLMYRAFEVLPKMVMTPYTAFQKELHGETEEVYLEEMVGRVNANMILPYPPGVPLVM
PGEMITEESRPVLEFLQMLCEIGAHYPGFETDIHGAYRQADGRYTVKVLKENTK
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atgaacgttattgctatcatgaaccacatgggcgtctactttaaagaagagcctattcgt
gaactgcatcgtgcactggaaggtttaaatttccgtatcgtctatccaaacgaccgagaa
gacctgctgaagctgattgaaaataactcccgcctttgcggcgtcattttcgactgggat
aaatataaccttgagctttgcgaagagattagcaagctgaacgagtatatgccgctgtac
gccttcgccaacagctactctacgctggacgtcagcctcaacgatctgagaatgcaggtt
cgcttctttgaatatgctttaggcgccgcagccgatatcgcggcgaaaattcgccagaat
accgatgaatacatcgacaatattctgccgccgctgacaaaagcgttgttcaaatatgtg
cgcgaagggaaatatactttctgtacgcctggccacatgggcgggaccgctttccagaaa
agccccgtcggcagcatcttttatgatttcttcggcccgaacacgatgaaatccgatatt
tcgatttccgtttccgaactgggttcgctgctggaccactccggcccgcataaagaagcg
gaagagtatatcgcccgcgtctttaacgccgaacgtagctacatggtgacgaacggcacc
tctacggcgaacaaaatcgtcggtatgtactccgcgccggcaggcagcacggtactgatt
gaccgtaactgccataaatcgctgacccatctgatgatgatgagcgacattacgccgatt
tatttccgcccaacccgtaacgcctacggtattcttggcggtattccgcaaagcgagttc
cagcacgccactatcgctaaacgggtaaaagagacgcctaacgcaacctggccggtccat
gctgttattactaactcaacctatgacggtctgttgtataacactgactacatcaagaaa
actctggatgtgaagtccattcattttgactccgcctgggtgccttataccaatttctcc
cctatttatcagggtaaatgcggtatgagcggcgaccgtgtggaaggcaaaatcatttat
gaaacccagtccacgcataaactgctggcggcgttttcacaggcatccatgattcatgtt
aaaggcgacattaacgaagaaacctttaacgaagcctacatgatgcataccaccacttct
ccgcactacggtatcgtagcgtctactgaaaccgcagcggcgatgatgaaaggtaatgcg
ggtaaacgcctgattaacggctctattgaacgtgcgattaaattccgtaaagaaattaaa
cgcctgaaaagcgaatctgacggctggttctttgacgtatggcagccggaacatatcgat
ggagctgagtgctggccgctgcgttcagatagcgcatggcatggcttcaaaaatatcgat
aacgaacacatgtacctcgacccgatcaaagtcactatcctgacgccggggatgaagaaa
gacggtacgatggatgagttcggtattccggcaagtctggtcgccaaatatctcgatgaa
cgcggcatcatcgtagaaaaaaccggtccatacaacctgctgttcctgttcagcattggt
atcgacaaaaccaaagctctgagcctgctgcgcgcgctcactgaatttaaacgcgccttt
gacctgaacctgcgcgtcaaaaacattctgccggcactgtaccgcgaagcgcctgagttt
tatgaaaatatgcgcatccaggaactggcgcagaatattcataaactggtcgaacatcat
aatctgccggacttaatgtaccgtgcgtttgaagtgctgccgaaaatggtgatgacgccg
tatactgcgttccagaaagagctgcatggcgaaacggaagaggtgtatcttgaagagatg
gttggacgcgtcaacgccaacatgatccttccttaccctccgggagtgccgctggtgatg
cctggtgaaatgatcaccgaggaaagccgtccggtactggaattcctgcaaatgctgtgc
gaaatcggcgcccactatccgggcttcgaaaccgatatccacggcgcctatcgtcaggca
gacggacgttacaccgttaaggtgctgaaagaaaatacgaaataa
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