KEGG   Salmonella enterica subsp. enterica serovar Thompson: IA1_14735
Entry
IA1_14735         CDS       T02868                                 
Name
(GenBank) 2-octaprenyl-6-methoxyphenyl hydroxylase
  KO
K18800  2-polyprenylphenol 6-hydroxylase [EC:1.14.13.240]
Organism
sene  Salmonella enterica subsp. enterica serovar Thompson
Pathway
sene00130  Ubiquinone and other terpenoid-quinone biosynthesis
sene01100  Metabolic pathways
sene01110  Biosynthesis of secondary metabolites
sene01240  Biosynthesis of cofactors
Module
sene_M00117  Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol
Brite
KEGG Orthology (KO) [BR:sene00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00130 Ubiquinone and other terpenoid-quinone biosynthesis
    IA1_14735
Enzymes [BR:sene01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.13  With NADH or NADPH as one donor, and incorporation of one atom of oxygen into the other donor
    1.14.13.240  2-polyprenylphenol 6-hydroxylase
     IA1_14735
SSDB
Motif
Pfam: FAD_binding_3 SE DAO Pyr_redox_2 Thi4 NAD_binding_8 HI0933_like Trp_halogenase Pyr_redox FAD_binding_2
Other DBs
NCBI-ProteinID: AGX11661
LinkDB
Position
complement(3079450..3080652)
AA seq 400 aa
MQSVDVAIVGGGMVGLTVACGLQGSGLRVAVLDHVVPQPLANDAPPQLRVSAINAASEKL
LTRLGVWSNIVARRASCYHGMEVWDKDSFGRITFDDASMGYSHLGHIVENSVIHYALWQK
AQQAADITLMAPAELQQVAWGENDAFLTLKDGAMLTARLVIAADGANSWLRNKADIPLTF
WDYRHHALVATIRTEEPHGAVARQVFHGEGILAFLPLSDPHLCSIVWSLSPQDAERMQQS
GDEAFNQALTIAFDNRLGLCRLESERQVFPLTGRYARQFAAHRLALVGDAAHTIHPLAGQ
GVNLGFMDAAELVDDLRRLQRQGKDIGQHLYLRRYERSRKHSAAMMLAGMQGFRDLFAGE
NPAKKLLRDIGLKLADTLPGVKPQLLRQAMGLNDLPQWLR
NT seq 1203 nt   +upstreamnt  +downstreamnt
gtgcaaagtgttgatgtagcaatagttggcggaggcatggtgggactgactgtcgcctgc
ggcttgcaggggagcggcttgcgcgttgcggtactggatcacgttgtcccccagccgttg
gcgaacgatgccccgcctcagcttcgggtgtcggcgattaatgccgccagcgaaaaactg
cttacccgtcttggcgtatggtcaaacattgtggcgcgacgggcaagttgctaccacggt
atggaagtctgggataaagacagctttggccgtattacgtttgatgacgcaagcatggga
tatagccatctggggcatattgttgaaaacagcgtcattcactacgcattgtggcaaaaa
gcgcagcaagcggcggatatcaccttaatggcgccagcggagttacagcaggttgcctgg
ggagagaacgacgccttcctgactttaaaagacggcgcgatgttaaccgcgcgtctggtg
attgccgcggatggcgccaactcctggctgcgtaacaaagcggatattcccttaactttc
tgggactaccgtcaccatgcgctggtagcgactatccgcaccgaagagccgcacggcgcg
gttgctcgccaggtgtttcatggtgaaggtattctggcgtttttgccgttaagcgatccg
catctgtgttccattgtctggtcgctttctccgcaggatgcggagcgtatgcaacagagc
ggcgacgaggcgtttaaccaggcgttgactatcgccttcgataatcggctgggcttatgc
cgcctggaaagcgaacggcaggtttttccgctgacgggccgctatgctcgccagtttgcc
gcgcatcgtctggcgttagtcggcgatgccgcgcacaccatccatccgctggcagggcaa
ggcgtcaacctcggctttatggacgcggccgaactggtggacgatctgcgtcggcttcag
cgccagggcaaagacattggccaacatctttatctccgtcgttatgagcgtagccgtaaa
catagtgcggcgatgatgcttgccgggatgcaaggttttcgtgacctgtttgccggcgaa
aatccggcaaaaaaattgctgcgcgacatcggactgaaactggcggatacgctccccggc
gtcaaaccccaactgcttcgccaggcaatggggctaaacgaccttccgcaatggcttcgt
taa

KEGG   Salmonella enterica subsp. enterica serovar Thompson: IA1_15840
Entry
IA1_15840         CDS       T02868                                 
Name
(GenBank) hypothetical protein
  KO
K24843  2-(all-trans-polyprenyl)phenol 6-hydroxylase (prephenate) accessory factor UbiT
Organism
sene  Salmonella enterica subsp. enterica serovar Thompson
Pathway
sene00130  Ubiquinone and other terpenoid-quinone biosynthesis
sene01100  Metabolic pathways
sene01110  Biosynthesis of secondary metabolites
sene01240  Biosynthesis of cofactors
Module
sene_M00989  Ubiquinone biosynthesis, O2-independent, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol
Brite
KEGG Orthology (KO) [BR:sene00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00130 Ubiquinone and other terpenoid-quinone biosynthesis
    IA1_15840
SSDB
Motif
Pfam: SCP2 Alkyl_sulf_C DUF3199 MDMPI_C
Other DBs
NCBI-ProteinID: AGX13448
LinkDB
Position
complement(3301414..3301938)
AA seq 174 aa
MLDKLRSRLVHAGPSLMSVPVKLTPFALKRQVLEQVLSWQFRQALADGELEFLEGRWLSI
HVRDIDLKWYTTVENEKLIVSQQADADVSFSADASDLLMIAARKQDPDTLFFQRRLVIEG
DTELGLYVKNLMDAIELEQMPKALRVMLLQLADFVEAGMKNSPETKQTSVGEPC
NT seq 525 nt   +upstreamnt  +downstreamnt
gtgttagataaactgcgttcacgcttagtccatgctggcccgtctctgatgagtgtaccg
gttaaactgacgccctttgcgctaaagcgccaggttctggaacaggttctgagctggcag
tttcgtcaggcgctggccgatggagagctggaattcctcgaaggtcgttggttaagcatt
catgttcgtgacatcgacttaaaatggtataccacggttgaaaatgaaaagctgatcgtt
agccagcaggcggatgctgacgtcagttttagcgccgacgccagcgatctgctaatgatc
gccgcccgtaaacaggacccggatacgctctttttccagcgtcgactggtcattgaaggc
gatactgagttagggttgtatgtgaagaatctgatggacgccatcgaactggagcagatg
ccgaaagcgttacgcgttatgctgctgcaactggcggattttgttgaggcgggaatgaaa
aactcgccggaaaccaaacagacctcggtaggtgaaccatgctaa

KEGG   Salmonella enterica subsp. enterica serovar Thompson: IA1_15845
Entry
IA1_15845         CDS       T02868                                 
Name
(GenBank) protease
  KO
K24844  2-(all-trans-polyprenyl)phenol 6-hydroxylase (prephenate) UbiU [EC:1.97.1.15]
Organism
sene  Salmonella enterica subsp. enterica serovar Thompson
Pathway
sene00130  Ubiquinone and other terpenoid-quinone biosynthesis
sene01100  Metabolic pathways
sene01110  Biosynthesis of secondary metabolites
sene01240  Biosynthesis of cofactors
Module
sene_M00989  Ubiquinone biosynthesis, O2-independent, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol
Brite
KEGG Orthology (KO) [BR:sene00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00130 Ubiquinone and other terpenoid-quinone biosynthesis
    IA1_15845
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:sene01002]
    IA1_15845
Enzymes [BR:sene01000]
 1. Oxidoreductases
  1.97  Other oxidoreductases
   1.97.1  Sole sub-subclass for oxidoreductases that do not belong in the other subclasses
    1.97.1.15  2-(all-trans-polyprenyl)phenol 6-hydroxylase (prephenate)
     IA1_15845
Peptidases and inhibitors [BR:sene01002]
 Peptidases of unknown catalytic type
  Family U32
   IA1_15845
SSDB
Motif
Pfam: Peptidase_U32 AP_endonuc_2
Other DBs
NCBI-ProteinID: AGX11846
LinkDB
Position
3302155..3303150
AA seq 331 aa
MELLCPAGNLPALKAAIENGADAVYIGLKDDTNARHFAGLNFTEKKLQEAVSFVHQHRRK
LHIAINTFAHPDGYARWQRAVDMAAQLGADALILADLAMLEYAAERYPHIERHVSVQASA
TNEEAIRFYHRNFDVHRVVLPRVLSIHQVKQLARVTPVPLEVFAFGSLCIMAEGRCYLSS
YLTGESPNTVGACSPARFVRWQQTPQGLESRLNDVLIDRYQDGENAGYPTLCKGRYLVDG
ERYHALEEPTSLNTLELLPELMAANIASVKIEGRQRSPAYVSQVAKVWRQAIDRCKAAPQ
NFVPQRDWMETLGAMSEGTQTTLGAYHRKWQ
NT seq 996 nt   +upstreamnt  +downstreamnt
atggagctgctctgccctgccggaaatctcccggcgctgaaggcggccatcgaaaacggc
gctgacgccgtttatatcgggttaaaagacgataccaatgcccgtcattttgccggcctt
aactttaccgaaaaaaaattgcaggaagcggtgagttttgttcaccagcatcgccgcaaa
ttacacatcgccattaatacttttgcgcatccggacggctatgcccgctggcagcgcgcc
gtggatatggcggcgcagcttggcgccgacgcgctgattcttgccgacctcgctatgctg
gaatatgccgcagagcgttacccgcatattgagcgccatgtttccgttcaggcctcggca
accaacgaagaggcgattcgcttttatcaccgcaactttgatgtccaccgtgtagtactg
ccgcgtgtactgtcgattcaccaggtaaaacaactggcccgcgtcacgccggtgccgctg
gaggtattcgcgtttggcagcctgtgcattatggcggaaggtcgctgctatctttcttcc
tacctgacgggggagtcgcccaataccgtcggcgcctgctctcccgcccgctttgtccgt
tggcagcaaacgccgcaggggctggaatcgcgcctgaatgatgtcctgattgaccgttac
caggatggcgaaaacgcaggctacccaacgctgtgtaaaggccgctatttagtggacggc
gagcgctatcacgcgctggaggagccaaccagcctgaacacgctggaactgctgccggag
ctcatggcggcgaacatcgcttcggtgaagatcgaaggccgccagcgcagcccggcctac
gtcagccaggtggcgaaagtgtggcgccaggcgatcgatcgctgcaaagccgccccgcaa
aacttcgttccacagcgcgactggatggagacgctcggcgcgatgtccgaaggcacccaa
accacgcttggcgcatatcaccgtaaatggcagtga

KEGG   Salmonella enterica subsp. enterica serovar Thompson: IA1_15850
Entry
IA1_15850         CDS       T02868                                 
Name
(GenBank) protease
  KO
K24845  2-(all-trans-polyprenyl)phenol 6-hydroxylase (prephenate) UbiV [EC:1.97.1.15]
Organism
sene  Salmonella enterica subsp. enterica serovar Thompson
Pathway
sene00130  Ubiquinone and other terpenoid-quinone biosynthesis
sene01100  Metabolic pathways
sene01110  Biosynthesis of secondary metabolites
sene01240  Biosynthesis of cofactors
Module
sene_M00989  Ubiquinone biosynthesis, O2-independent, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol
Brite
KEGG Orthology (KO) [BR:sene00001]
 09100 Metabolism
  09108 Metabolism of cofactors and vitamins
   00130 Ubiquinone and other terpenoid-quinone biosynthesis
    IA1_15850
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:sene01002]
    IA1_15850
Enzymes [BR:sene01000]
 1. Oxidoreductases
  1.97  Other oxidoreductases
   1.97.1  Sole sub-subclass for oxidoreductases that do not belong in the other subclasses
    1.97.1.15  2-(all-trans-polyprenyl)phenol 6-hydroxylase (prephenate)
     IA1_15850
Peptidases and inhibitors [BR:sene01002]
 Peptidases of unknown catalytic type
  Family U32
   IA1_15850
SSDB
Motif
Pfam: Peptidase_U32
Other DBs
NCBI-ProteinID: AGX11847
LinkDB
Position
3303159..3304037
AA seq 292 aa
MKYSLGPVLYYWPKETLEDFYQQAAKSSADVIYLGEAVCSKRRATKVGDWLEMAKSLAAS
GKQVALSTLALVQASSELSELKRYVDNGDFLLEASDLGVVNLCAERKLPFVAGHALNCYN
AVTLRRLLKEGMVRWCMPVELSRDWLVNLLNQCDELGIRNQFEVEVLSYGHLPLAYSARC
FTARSEDRPKDECETCCIKYPNGRDVLSQENQQVFVLNGIQTMSGYVYNLGNELTSMQGL
VDIVRLSPLGTETFAMLDAFRANENGGAPLALAAHSDCNGYWKRLAGLELQA
NT seq 879 nt   +upstreamnt  +downstreamnt
atgaaatattccttaggaccggtgctttattactggccgaaagagacgctggaagatttt
tatcagcaggccgcaaaaagcagcgctgatgtcatttatctgggcgaagcggtgtgcagc
aagcgtcgcgcaaccaaagtcggcgactggctggaaatggcgaaatccctcgccgccagc
ggtaagcaggtggcgctctccaccctggcgctggtacaggcgtcatctgaattaagcgag
ctgaaacgctatgtggacaacggcgattttctgctggaagccagcgatcttggcgtggtg
aatctgtgcgccgagcgcaaactgccgtttgtcgccggccatgcgctgaactgctacaac
gcggtcacgctgcgccggttgctgaaagaaggcatggtacgctggtgtatgccggtggag
ctgtcccgcgactggctggtgaatttgcttaatcagtgcgatgaactgggcatccgcaat
cagtttgaagtggaagtgttgagctacgggcatctgccgctggcctactccgctcgctgc
tttaccgcccgttcggaagaccgcccgaaagatgagtgcgaaacctgctgtatcaagtat
ccaaacggtcgtgacgtgctctcgcaagagaatcagcaggtgtttgtgcttaacggtatt
cagaccatgagcggctatgtctataaccttggcaacgaactgacgtcgatgcagggattg
gtcgatatcgtgcggctgtcgccgttgggtacggagacatttgccatgcttgatgccttt
cgcgctaacgaaaacggcggcgcgccattagcgcttgccgcgcatagcgactgcaacggc
tactggaagcggctggccgggctggagctacaggcctag

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