Salmonella enterica subsp. enterica serovar Thompson: IA1_15895
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Entry
IA1_15895 CDS
T02868
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sene
Salmonella enterica subsp. enterica serovar Thompson
Brite
KEGG Orthology (KO) [BR:
sene00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sene03016
]
IA1_15895 (truB)
Enzymes [BR:
sene01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
IA1_15895 (truB)
Transfer RNA biogenesis [BR:
sene03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
IA1_15895 (truB)
Prokaryotic type
IA1_15895 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AGX11856
LinkDB
All DBs
Position
complement(3313926..3314870)
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AA seq
314 aa
AA seq
DB search
MSRPRRRGRDIHGVLLLDKPQGMSSNDVLQKVKRIYNANRAGHTGALDPLATGMLPICLG
EATKFSQYLLDSDKRYRVIARLGQRTDTSDADGQIVQERPVTFSAEQLASALETFRGDIE
QIPSMYSALKYQGKKLYEYARQGIEVPREARPITVYELLFIRHEGNELELEVHCSKGTYI
RTIVDDLGEKLGCGAHVTYLRRLTVSKYPVDRMVTLEHLRELVAQAEQQGVPAAQLLDPL
LMPMDSPASDYPVVNLPLTSSVYFKNGNPVRTTGAPLKGLVRVTEGEDDKFIGMGEIDDE
GRVAPRRLVVEYPA
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtcctcgtcgtcgtggccgcgacattcacggcgttctgctgctggataagccg
cagggtatgtccagcaatgacgtgctgcagaaagttaagcgcatctacaatgctaaccgc
gccgggcataccggcgcgctggacccgctggcgaccggcatgttgccgatttgcctcggc
gaagcgacaaaattttcgcagtacctgctggattctgacaaacgctatcgtgttattgcc
cgtctggggcagcgcacggatacctctgacgccgatggtcaaatcgtgcaggagcgtccg
gtgactttcagcgctgagcagcttgcgagcgcgctggagacctttcgtggggatatcgaa
cagattccctcgatgtattcggcgctgaagtatcagggcaagaaactgtacgaatatgcc
cgccagggtatcgaagtgccgcgcgaagcccgcccgattaccgtctacgaactgctgttt
attcgccatgaaggtaacgagctggagctggaagttcattgctccaaaggcacctatatt
cgtaccattgttgatgatttaggtgagaaactgggctgtggcgcgcacgtaacgtacctg
cgtcgtctgacggtcagcaagtatccggtggatcgtatggtgacgctggagcatttgcgc
gagctggtagcacaggcggaacagcagggcgttccggcggcgcagttgctcgatccatta
ttgatgccaatggacagtccagcttcggactatcctgttgttaatctgccgttaacatct
tcggtatacttcaaaaatggcaacccggttcgtaccacgggcgcgccgttgaagggactg
gttcgtgtgacggaaggtgaagacgataaatttatcggtatgggcgaaattgacgacgaa
ggccgtgtcgcgcctcgtcggctggtagttgagtacccagcgtaa
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integrated database retrieval system
