Salmonella enterica subsp. enterica serovar Thompson: IA1_17890
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Entry
IA1_17890 CDS
T02868
Name
(GenBank) selenocysteine synthase
KO
K01042
L-seryl-tRNA(Ser) seleniumtransferase [EC:
2.9.1.1
]
Organism
sene
Salmonella enterica subsp. enterica serovar Thompson
Pathway
sene00450
Selenocompound metabolism
sene00970
Aminoacyl-tRNA biosynthesis
sene01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sene00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
IA1_17890
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
IA1_17890
Enzymes [BR:
sene01000
]
2. Transferases
2.9 Transferring selenium-containing groups
2.9.1 Selenotransferases
2.9.1.1 L-seryl-tRNASec selenium transferase
IA1_17890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SelA
Se-cys_synth_N
Aminotran_5
PALP
Motif
Other DBs
NCBI-ProteinID:
AGX12176
LinkDB
All DBs
Position
complement(3732744..3734135)
Genome browser
AA seq
463 aa
AA seq
DB search
MTSETRTLYSQLPAIDRLLHDSAFLSLRDRYGHTQVVDLLRRMLDDARDVIRNTQTLPDW
YADWAQEAKLRLENAAQSALRPVINLTGTVLHTNLGRALQAQEAIEAVTQAMRAPVTLEY
DLDGAGRGHRDRALATLLCRITGAEDACIVNNNAAAVLLMLAATASGKEVVVSRGELVEI
GGAFRIPDVMRQAGCTLHEVGTTNRTHAKDYRQAVNENTGLLMKVHTSNYSIEGFTKTVE
EAELAEIGRELDIPVVADLGSGSLVDLSQYGLPKEPMPQQLIAAGVSLVSFSGDKLLGGP
QAGIIVGKKAMIAQLQSHPLKRALRADKMTLAALEATLRLYLHPEALAEKLPTLRLLTRS
EASIREQAQRLQARLAARYGDEFALEVKPCLSQIGSGSLPVDRLPSAAMTFTPHDGRGSR
LEALAARWRMLPVPVIGRIYDGRLWLDMRCLEDESRFMEMMLK
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgacaagcgaaacgcgtacactctacagccagcttcctgctatcgatcgcttattgcac
gatagcgcttttctttctctgcgcgatcggtatggtcatacccaggtggttgatctgctt
aggcggatgcttgacgacgcgcgcgacgtcatccggaatacgcaaacgcttcccgactgg
tacgcagactgggcgcaagaggcgaaactccggctggaaaatgcggcgcaaagcgcgctg
cgcccggtgattaacctgacggggacggtgctgcacaccaaccttggccgcgcattgcag
gcgcaagaagcgattgaggcggtaacgcaggcgatgcgcgcgccggtgacgctggaatac
gatttggatggcgccgggcgggggcatcgcgaccgggcactggcgacgctgttatgccga
atcaccggggcggaggacgcctgtatcgtcaataacaatgcggcggcggtattgctgatg
ttggcggcgaccgccagcggcaaagaggtggtagtttcgcgtggcgagctggtcgaaatc
ggcggcgcgtttcgtattccggatgttatgcgccaggcgggctgtacgctgcatgaagtg
ggcaccaccaaccggacgcacgcgaaagattaccgtcaggcggtaaatgaaaataccggg
ctgttgatgaaggtgcataccagtaattacagcattgagggctttaccaaaacggtagag
gaagcggaactggcggaaatcggacgagagctggatattccggtggtggcggatctgggc
agcggttcgctggtggatttaagtcaatatggcttacccaaagagccgatgccgcagcag
ctcattgccgcaggcgtcagcctggtaagcttctccggcgataagttgctgggcgggccg
caggccgggattatcgtcggcaaaaaagcgatgattgcccaactgcaaagccatccgctg
aaacgcgctctgcgcgctgataaaatgacgctggcggcgctggaggcaacgttacgtctg
tatctgcacccggaagcgttggcggagaaattacccacgctgcgtctgttaacccgcagc
gaagcgtcgattcgcgaacaagcgcagcggttacaggcgcggctggcggcacgttacggc
gatgaatttgcgctggaggttaaaccctgcctgtcgcaaatcggcagcggttcattaccg
gtagaccgccttcccagcgccgccatgacctttaccccgcacgacgggcgcggtagccgg
ctggaggcactggcggcccgctggcgcatgctgcctgtaccggtcattggccgaatttat
gatggccgtttatggctggatatgcgctgtcttgaagacgaaagccggtttatggagatg
atgctgaaatga
Salmonella enterica subsp. enterica serovar Thompson: IA1_21675
Help
Entry
IA1_21675 CDS
T02868
Name
(GenBank) L-seryl-tRNA selenium transferase
KO
K01042
L-seryl-tRNA(Ser) seleniumtransferase [EC:
2.9.1.1
]
Organism
sene
Salmonella enterica subsp. enterica serovar Thompson
Pathway
sene00450
Selenocompound metabolism
sene00970
Aminoacyl-tRNA biosynthesis
sene01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sene00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
IA1_21675
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
IA1_21675
Enzymes [BR:
sene01000
]
2. Transferases
2.9 Transferring selenium-containing groups
2.9.1 Selenotransferases
2.9.1.1 L-seryl-tRNASec selenium transferase
IA1_21675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SelA
Cys_Met_Meta_PP
Beta_elim_lyase
DegT_DnrJ_EryC1
DUF5806
Motif
Other DBs
NCBI-ProteinID:
AGX12761
LinkDB
All DBs
Position
4539426..4540544
Genome browser
AA seq
372 aa
AA seq
DB search
MPSIFEKYQLKQVINVSGRMTALGVSTPRPEVIDAAMAGMNQYFEMKDLVNKTGEYIAKL
LEVEGATVVSCASAGLAQSVAAVLVQDSDWLLENLHVTPIENNEIVLPKGHNVNFGAPVG
TMVALGGGKLVEAGYANECSAAQLAAAITPRTAAILYIKSHHCVQKSMLSVEQAAVVART
HNLPLIVDAAAEEDLQCYYRVGADLVIYSGAKAIEGPTSGLVIGKTQYVEWVKRQSAGIG
RAMKVGKEGIVGLTCAIELYLRAQKESGAEMVEKMAPFIDTLNTFNGVSARVVWDSAGRD
IARTEIKFDEAVTGIATGDLVEALKQGEYAIYFRGYKANEGIIEADVRSVDRAQLAIVAR
RIGEVINQEKKA
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgccttcgatttttgagaagtatcaattaaaacaggtgattaacgtctccggacgtatg
acggcgctcggcgtctctacgccgcgcccggaagtgatagacgcggcgatggccggaatg
aatcagtatttcgagatgaaagatctggtgaataaaaccggtgagtacattgcgaaattg
ctggaggtggaaggggcgacggtagtctcctgcgccagtgcgggccttgcccagtcggtt
gctgcggtcctggttcaggacagcgactggctgctggaaaacctgcacgttacaccgatt
gaaaataacgaaatcgtcctgccaaagggccacaacgtcaactttggcgcgccggtggga
acgatggtggcgctgggcggcggcaaactggtggaagccggttacgccaacgaatgttcc
gccgcgcaattggcggcggccattacgccgcgcacggcggctattctctatatcaaatct
caccactgcgtacagaaaagtatgctcagcgtggagcaggctgcggtggtggcgcgcacg
cataatctgccgctgattgtggacgcggcggcggaagaagatttgcagtgctactaccgc
gtgggcgcagatctcgttatctatagcggcgcaaaagcgattgaagggccgaccagcggg
ctggtgattggcaaaacgcagtatgttgagtgggtaaaacgtcagtcagcgggcattggc
cgggcgatgaaggtgggcaaggagggaattgttggcctgacctgcgccattgaactctac
ctgcgggcgcaaaaagagagcggcgcggagatggtagaaaaaatggcgccctttatcgac
acgttgaacacgtttaacggcgtcagcgcccgcgtagtgtgggacagcgccggacgcgat
atcgcgcgcacggaaattaagtttgatgaagccgttaccggcatcgccacaggcgacctg
gtggaggcgctcaaacagggcgagtacgcgatttactttcgcggatacaaagccaacgaa
gggattattgaagcggatgtccgcagcgtcgatcgcgcgcagttagcgattgtggcgcgt
cgtattggcgaggtgattaatcaggagaaaaaagcatga
DBGET
integrated database retrieval system
