Salmonella enterica subsp. enterica serovar Thompson: IA1_19175
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Entry
IA1_19175 CDS
T02868
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
sene
Salmonella enterica subsp. enterica serovar Thompson
Pathway
sene00300
Lysine biosynthesis
sene00470
D-Amino acid metabolism
sene01100
Metabolic pathways
sene01110
Biosynthesis of secondary metabolites
sene01120
Microbial metabolism in diverse environments
sene01230
Biosynthesis of amino acids
Module
sene_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sene00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
IA1_19175 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
IA1_19175 (dapF)
Enzymes [BR:
sene01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
IA1_19175 (dapF)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
AGX12378
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Position
4004617..4005441
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AA seq
274 aa
AA seq
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MQFSKMHGLGNDFMVVDAVTQNVFFSPELIRRLSDRHLGVGFDQLLVVEPPYDPELDFHY
RIFNADGSEVSQCGNGARCFARFVRLKGLTNKRDIRVSTANGRMVLSVTEDELVRVNMGE
PNFEPAQVPFRANKAEKTYIMRAAEQTILCGVVSMGNPHCVIQVDNVDTAAVETLGPVLE
SHERFPERANIGFMQVVRREHIRLRVYERGAGETRACGSGACAAVAVGIQQGLLAEEVRV
ELPGGRLDIAWKGPGHPLYMTGPAAHIYDGFIHL
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcaattctctaaaatgcatggccttggcaacgattttatggtcgtcgacgcggtaacg
cagaatgtctttttttcgccggaactgattcgtcggctatccgacagacacttgggcgta
gggttcgatcagctgctggtggttgagccgccctatgatcctgagttggactttcattac
cgcatcttcaacgccgacggcagtgaagtctcgcagtgcggcaatggcgcgcgctgtttc
gcgcgatttgttcgcctgaaagggctaaccaataaacgcgacattcgggtcagtaccgcg
aatggccggatggtactgagcgtcacggaagatgaactggtgcgggtgaatatgggggag
ccaaactttgaacccgcgcaggtgccttttcgcgccaacaaagcggaaaagacgtatatt
atgcgagcggcggaacagaccatattgtgcggcgtggtttcaatgggtaatccgcactgt
gtcattcaggttgataacgtcgacacggcggccgttgaaacactggggccggttctggaa
agccatgagcgttttccggaacgtgccaacattggttttatgcaggttgtaagacgtgag
catatccggctgcgagtctatgaacgcggcgcaggggagacccgtgcgtgcggcagcggc
gcgtgcgctgccgttgccgtggggattcagcaggggctgctggctgaagaagtacgcgtg
gaattaccgggcggtcggctggatatcgcctggaaaggtccgggtcatccgttatacatg
actggtccggcggcacatatctacgacggatttatccatttatga
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