Salmonella enterica subsp. enterica serovar Thompson: IA1_21720
Help
Entry
IA1_21720 CDS
T02868
Symbol
treR
Name
(GenBank) trehalose repressor
KO
K03485
LacI family transcriptional regulator, trehalose operon repressor
Organism
sene
Salmonella enterica subsp. enterica serovar Thompson
Brite
KEGG Orthology (KO) [BR:
sene00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sene03000
]
IA1_21720 (treR)
Transcription factors [BR:
sene03000
]
Prokaryotic type
Helix-turn-helix
LacI family
IA1_21720 (treR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LacI
Peripla_BP_3
Peripla_BP_1
HTH_3
HTH_23
HTH_31
HTH_IclR
HTH_7
MarR_2
HTH_Tnp_ISL3
AAA_18
MarR
HTH_Crp_2
CENP-B_N
HTH_26
TrmB
HHH
HTH_28
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
AGX12768
LinkDB
All DBs
Position
complement(4550295..4551242)
Genome browser
AA seq
315 aa
AA seq
DB search
MQNRLTIKDIARLSGVGKSTVSRVLNNESGVSERTRERVEAVMNQHGFSPSRSARAMRGQ
SDKVVAIIVTRLDSLSENLAVQTMLPAFYEQGYDPIMMESQFSPTLVMEHLGMLRRRNID
GVVLFGFTGITEELISPWKASLVLLARDAQGFASVCYDDEGAIHILMQRLYEQGHRNISF
LGVPHSDITTGKRRHDAYLAFCKKHKLHPVAALPGLAMKQGYEHTASVIMPDTTALVCAT
DTLALGASKYLQEQRIETLQLASVGNTPLIKFLHPEIVTVDPGYAEAGRQAASQLIEQIN
GRCDPRRIVIPSTLA
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaccggctcactatcaaagacatcgcccgcctgagcggcgtagggaaatcaacc
gtttcccgcgtgcttaacaatgaaagcggcgtaagcgaacgtacccgcgagcgtgtcgaa
gcggtgatgaatcaacacggtttctctccgtcccgctccgcccgcgcgatgcggggacaa
agcgataaagtggtcgctattatcgtcactcgccttgattcgttgtctgaaaacctcgcg
gttcagaccatgctgcctgcgttttatgaacagggctacgaccctattatgatggaaagc
cagttctcgccgacgctggtaatggaacatctgggcatgctcagacgacgtaacattgat
ggcgtggtgctgtttggctttaccggcatcacagaagagttgatctccccctggaaagcc
tcgctggtgctgctggcaagagatgcgcaaggttttgcctccgtctgttacgacgacgag
ggcgcgattcatatccttatgcagcggctgtatgagcagggacaccgcaacattagcttt
ctgggcgttccccatagcgatattaccaccggcaaacgtcggcatgacgcatacctggcg
ttttgcaaaaaacataaacttcatcccgtcgccgccctgcccggtcttgccatgaagcag
ggctatgagcatacggcaagcgtcatcatgccggataccaccgcgttagtctgcgccacc
gatacgctggcgttgggcgccagtaagtatttacaggagcaacgtattgagacgctgcaa
ctggcaagcgtcgggaacacgccgctgataaaattcctgcacccggagatcgtcactgtc
gatcctggctatgctgaagccggacgacaggcggcttcgcagctgatcgaacagatcaat
ggccgctgcgatccgcgccggatcgtcattccttctaccctcgcctga
DBGET
integrated database retrieval system
