KEGG   Salmonella enterica subsp. enterica serovar Thompson: IA1_22035
Entry
IA1_22035         CDS       T02868                                 
Name
(GenBank) cell density-dependent motility repressor
  KO
K21645  LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
Organism
sene  Salmonella enterica subsp. enterica serovar Thompson
Brite
KEGG Orthology (KO) [BR:sene00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:sene03000]
    IA1_22035
Transcription factors [BR:sene03000]
 Prokaryotic type
  Helix-turn-helix
   LysR family
    IA1_22035
SSDB
Motif
Pfam: LysR_substrate HTH_1
Other DBs
NCBI-ProteinID: AGX12806
LinkDB
Position
complement(4614395..4615303)
AA seq 302 aa
MDVTGAGLHNIETKWLYDFLTLEKCRNFSQAAIIRNVSQPAFSRRIRALEHAVGVELFNR
QVSPLQLSEQGKIFHSQVRHLLQQLESNLTELRGGSDYTLRKIKIAAAHSLSLGLLPTIV
KQMPTQFTYAVEAIDVDQAVDMLREGQSDFIFSYHDENLQQAPFDNIRLFESRLFPVCAN
NGRGEPRYTLEQPHFPLLNYSQNSYMGRLINRTLTRHAELSFSTFFVSSMSELLKQVAMD
GCGIAWLPEYAIRQEITDGRLIVLDADELVIPIQAYAYRMNTRMSQVAETFWRDLRGLQA
AL
NT seq 909 nt   +upstreamnt  +downstreamnt
atggatgtaactggagcaggtttgcacaatattgagacaaaatggctatatgattttctg
acgctggaaaagtgccgcaatttctctcaggccgccattatccgcaacgtatcgcaaccc
gcttttagccggcggattcgcgctctggaacatgccgtgggcgttgaactgtttaaccga
caggtctcgccgctacagctttccgaacagggtaaaatctttcactctcaggttcgccac
ctgttacagcagctggaaagtaatctgaccgaactgcgcggcggcagcgattatacgctg
cgtaaaatcaagattgccgccgcccattcgctctccctcggcctgttgccgaccatcgtt
aagcagatgccgacgcagtttacctacgccgttgaggcgatagatgtcgaccaggcggtg
gatatgttacgtgaggggcaaagcgattttatcttttcttatcacgatgaaaacctgcaa
caagcgccgtttgataatatccgtctgtttgagtcgagactgtttccggtttgcgccaac
aatggccggggcgagccgcgctatacgcttgagcagccgcactttcccctgcttaattac
agtcaaaactcctatatgggccggctgataaatcgtactctgactcgccatgctgaactg
agtttcagtacatttttcgtctcttcgatgagtgaattgttaaaacaggttgcgatggac
ggctgcggaatcgcctggttgcccgagtatgctatccgtcaggagattaccgacgggcgc
ctgatagtgcttgatgccgacgaactggttattccgatccaggcttatgcttatcgcatg
aatacccgcatgagtcaggtagccgaaacattttggcgcgacctgcgtgggcttcaggcc
gcgctgtaa

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