Spirosoma endbachense: GJR95_03630
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Entry
GJR95_03630 CDS
T09865
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
senf
Spirosoma endbachense
Pathway
senf00061
Fatty acid biosynthesis
senf00071
Fatty acid degradation
senf01100
Metabolic pathways
senf01212
Fatty acid metabolism
senf02024
Quorum sensing
senf04146
Peroxisome
Module
senf_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
senf00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
GJR95_03630
00071 Fatty acid degradation
GJR95_03630
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
GJR95_03630
09145 Cellular community - prokaryotes
02024 Quorum sensing
GJR95_03630
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
senf01004
]
GJR95_03630
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
senf04147
]
GJR95_03630
Enzymes [BR:
senf01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
GJR95_03630
Lipid biosynthesis proteins [BR:
senf01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
GJR95_03630
Exosome [BR:
senf04147
]
Exosomal proteins
Exosomal proteins of breast milk
GJR95_03630
Exosomal proteins of breast cancer cells
GJR95_03630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
QHV94173
UniProt:
A0A6P1VM79
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All DBs
Position
903700..905391
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AA seq
563 aa
AA seq
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METTVLQDQPYKTLVHFFYEWERSQPYKVFLRQPVGDHFIDITWGEAGRQVRIMATYLNS
LGLPPKSNIGLVSKNCAHWLIADMAILMSGHVSVPFYPTLTGPQLGQVLDHSECQVLFVG
KLDDWASMKIGVDDDVHKIAFPSYSPDKPSVDSEATQWNDVMANYAPMKGNPVPALEDLF
TIIYTSGTTGNPKGVMITYDAMVQAIDKTHRQMAHDLPETRFFSYLPLCHIAERNIVEAT
SIATGGTVYFAESLETFARNLAIARPTHFLAVPRIWTRFQMGVLAKMPQKKLDWLVRIPI
LSGIITRKIRKGLGLDDAKIILTGAAPMPLSLLLWFRRLGIHIQEAYGMTENLGAVSMMP
PDQIKDGTVGRVNEGMEVRTDPITGEIMTRSRWNMVGYYREPALTASTLKDGWLYTGDVG
VLDEDGFLKITGRVKEMYKSPKGEYIAPAQIEFGFADNNNIEQICVTGQQLPQPIALVVL
SEAARKTDRPTITQSLEKTLTGLNQRVHTYERVRKLIVVKEPWTVENNLMTPTMKMKRNI
IDAHYGTHYEPWFSREEVVVWEE
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgactgtacttcaagaccagccctataaaacgcttgtacatttcttctatgaa
tgggaacgctcacaaccatataaagtctttctgcgccaaccggtaggtgatcattttatc
gatattacatggggagaagccggtcggcaggtgcggataatggccacgtatctgaactcg
ctcggtttgccgccaaagagtaatataggactagtttccaagaattgtgcgcattggctt
atcgccgatatggcgattctgatgagtggacacgtatcggtgcctttttatccgacactg
accggcccgcaattaggacaggtgcttgaccacagtgaatgccaggtcttgtttgttggc
aaactggacgattgggcctcgatgaaaattggtgttgatgatgacgtccataaaattgct
tttccatcctattcaccggacaagccgtctgtcgatagcgaagctactcaatggaatgat
gtcatggcgaattatgcacccatgaaaggcaatccggtgccggccttggaggatttattt
acgattatctacacctctggcacaacgggcaacccgaaaggggttatgattacctacgat
gccatggtgcaggcaatcgataaaacccatcgccagatggcccatgatctgcccgaaaca
cgttttttctcatacctgccgttatgccatattgccgagcggaatatagttgaagcgacc
agcatcgctaccggcggaaccgtgtattttgcggaatcgttagaaacctttgcccgaaat
ctggcgatagcccgtccgactcattttctggccgtaccccgaatatggacacgtttccag
atgggcgttctggctaagatgccacagaaaaaattagactggttagtacgtattccgatt
ctgtcaggcatcatcacccgcaagatccgaaagggcctgggcctcgatgatgcaaaaata
attctaaccggtgctgcgccaatgccactctcgttgctcctgtggtttcgtcgattaggt
attcatatccaggaagcttatggcatgaccgaaaacctgggggcggtatcgatgatgcct
cctgaccagattaaagacgggaccgtaggacgtgtgaatgagggtatggaggtgcgtacc
gatcccattacaggtgagatcatgacgcgttcgcggtggaatatggtcggttattatcgg
gaaccagccctgacggcatcaaccctgaaggatggttggctgtatacgggcgatgttggt
gtgttggatgaggatggttttctgaaaatcaccggccgggttaaggaaatgtataagagt
ccaaaaggggaatacattgcgcctgcgcagattgaatttggctttgcggataataacaac
atcgaacagatctgcgtaacgggacagcagttgccgcaacccattgcgctggttgttctt
tcggaagccgcccgaaaaacagatcggccgacgattacgcaaagtctggaaaaaacgctt
acaggcttgaatcagcgggtgcatacctacgaaagagtcaggaaactcattgttgtaaaa
gaaccctggaccgttgaaaataacctgatgacgcccaccatgaaaatgaaacgcaacatt
attgatgcccactatggcacccactatgaaccctggtttagtcgggaagaagtggtggtc
tgggaagaataa
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