Spirosoma endbachense: GJR95_09110
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Entry
GJR95_09110 CDS
T09865
Name
(GenBank) integration host factor subunit beta
KO
K03530
DNA-binding protein HU-beta
Organism
senf
Spirosoma endbachense
Brite
KEGG Orthology (KO) [BR:
senf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
senf03032
]
GJR95_09110
03036 Chromosome and associated proteins [BR:
senf03036
]
GJR95_09110
03400 DNA repair and recombination proteins [BR:
senf03400
]
GJR95_09110
DNA replication proteins [BR:
senf03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
GJR95_09110
Chromosome and associated proteins [BR:
senf03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
GJR95_09110
DNA repair and recombination proteins [BR:
senf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
GJR95_09110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
HU-DNA_bdg
RecA-like_ORC2
HU-CCDC81_euk_1
Ogg-HhH
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
QHV95162
UniProt:
A0A6P1VST2
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All DBs
Position
2335507..2335809
Genome browser
AA seq
100 aa
AA seq
DB search
MTKADVIAEIADKTGIDKAEVTNTLETFFSVVKDSLAEGENIYVRGFGSFINKKRAKKVA
RNISKNTAMVIDEHFIPSFKPAKVFVEQVKTSDKAKVAAE
NT seq
303 nt
NT seq
+upstream
nt +downstream
nt
gtgacgaaagcagacgtaattgcagagatcgccgataagaccggaatcgataaggccgag
gtaacgaacactcttgagaccttcttttcggtggttaaggactcgttggccgagggagag
aatatctatgtgagagggttcggcagtttcattaacaagaaaagagccaagaaggtagcc
cggaacatctcgaaaaacaccgcaatggtgattgatgagcatttcatcccgagcttcaag
cccgccaaggttttcgttgagcaagtgaaaaccagcgacaaagccaaagtagcggctgag
taa
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