Spirosoma endbachense: GJR95_19880
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Entry
GJR95_19880 CDS
T09865
Name
(GenBank) SusC/RagA family TonB-linked outer membrane protein
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
senf
Spirosoma endbachense
Brite
KEGG Orthology (KO) [BR:
senf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
senf02000
]
GJR95_19880
Transporters [BR:
senf02000
]
Other transporters
Pores ion channels [TC:
1
]
GJR95_19880
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Plug
TonB_dep_Rec_b-barrel
CarbopepD_reg_2
CarboxypepD_reg
MetallophosN
Motif
Other DBs
NCBI-ProteinID:
QHV97129
UniProt:
A0A6P1VZI3
LinkDB
All DBs
Position
complement(4953882..4956953)
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AA seq
1023 aa
AA seq
DB search
MRKLLLVSFLFLAVACSSYAQSQVVSGRVTSSDDGAGLPGVSVSIKGRTQGTLTDASGNY
RLSTDGTVTLVYSFIGFTSVEEPVNNRSVINVELKTDVRNLSEVVVTGYGQQIKRDLTGN
IAKVRAADIQDQPVTTFDQALQGKAAGVQINSGSGKLGQGIQVRVRGQSSVSASNQPLYV
VDGTPVTTDNLSFNSASTNPLADINPQDIESVDILKDASAGAIYGARAANGVVLITTKRG
KAGRTNINFGAQYGSSKPTKKLNFLNTDQYVKFYNQAAANSDRIEGLDPADPDSYSSYMK
SFYDTQGLGTYGTPKQVSTNWGDLAYQDAPYQQYDLNINGGNEKTTFYLSGQLLDQKGIL
VGNALQRYSGRLNLDHQVSDRFRTGFNIGLTRTYNQRISADNQFDNPMQMVALPPMTPAT
DPTTGLPVGTPPGDISIPVYYNPLINIGNAYFNTTVYRNISNVYGQLQIIKGLTFRTEFG
LDVLNQQEELYYNSKTQRNFSAPQGVGQNRYVRVENYTTNNFFSYGAVFGKHAIDATLGM
SYQQSQQKTNFTEGRDFPSDAYRQIVSAARKTDGSSTQTDYRFLSYFARANYKFSDRYLL
GVSARVDGSSRFGRNSRYGFFPAVSAGWVLSEESFLKNNNTISFLKLRSSYGRTGNAEIQ
NFPQLGLFTGDANYGSLPGQRPSQLANPDLKWETTNQFDIGLDFGILNNRINGEIDYYNK
QTTGLLLNVNVPGTTGFATQFRNVGSLENKGFEFVLNTENLTGAFRWTTSFNAATNQNKI
TNLQGQIIEGGINAMSRAVEGQPLGVFFTQEYAGVDPANGDALWYKNTANPDGSLDRTTT
NVYSQAQRVVKGSPLPKWTGGITNTFSYKGITLSVLFNGVFGNKINFYGVGRYSSANGRF
EDNQTVDQLDAWTTQNTNTNVPEARLYYNNGAQSSSRFILDGSFVRLRTATLSYNLPKTL
INRVKLNSVRFFVTGQNLLTFTKYAGWDPEVNADYIVSNIAQGYDFYTAPQARTITGGIN
IGF
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaactcttactagttagcttcctatttcttgcggtagcttgcagtagctatgca
cagagtcaggtagtatcaggtagggtcacgtcatcggatgacggcgctggtctaccaggc
gtatcggtcagcataaaaggccgaacgcagggaacgttgaccgacgcatcgggcaattac
cgcctgtctactgatggtactgttacccttgtttatagcttcatcggctttacctccgtt
gaagaaccggtcaataatcgttctgtaatcaacgtagaactgaagactgacgtacgtaat
ttgagcgaagtcgttgttacaggttatggacagcagatcaagcgtgatctgactggtaat
attgcgaaggttagggctgcggatattcaggatcaacccgtaactacttttgatcaggct
cttcagggtaaagccgccggagtgcagatcaattcaggttcgggtaaattaggtcaggga
attcaggttcgggttcgggggcaatcgtctgtgtctgcctcgaatcagcccctgtatgtc
gttgatggaacgccggttacaaccgacaatctgagcttcaatagtgcttctacaaaccca
ttggccgatattaacccgcaggatattgagtctgtcgatattttgaaggatgcgtctgcc
ggggctatttacggagcaagagcggccaatggcgttgtgctgattactaccaagcgcgga
aaagccggtcggacgaatatcaactttggtgcgcaatatggatcgagcaaaccgacgaaa
aaacttaattttctgaatacggaccaatacgtcaaattttacaatcaggctgccgctaat
tcagaccgcatcgagggccttgatccagccgatcctgattcgtattcgtcctacatgaag
agcttttacgacacgcagggactcggcacctatggcactcctaaacaggtaagtacaaac
tggggagacctggcttatcaggatgcaccgtatcagcaatatgacttgaacataaacggc
ggtaatgagaaaacgacgttctatttatccggtcaattgctggatcagaaaggtattctg
gttggcaacgccctgcaacggtattctggtcgcctgaaccttgatcatcaggtgtcggat
cgcttccgcacaggcttcaacattggcctgacccgaacctataaccagcgcatttcggca
gataaccagtttgataatccaatgcagatggtggcccttccaccaatgacacccgctacg
gatccgactacgggtcttccggtaggtacccctcccggcgacatcagcattccggtttat
tataacccgctgatcaatattggcaatgcctattttaatacaacggtttaccggaatatc
agcaatgtgtacggtcagttgcagattatcaaagggttaacattccgcacggaatttggc
ctcgacgtattgaaccagcaggaagaactgtattacaacagtaaaacacagcgtaatttc
agcgccccacaaggcgtcggccagaaccgctacgtgcgcgtagagaattacacgaccaat
aatttcttttcctacggtgcagtcttcggtaagcatgccattgatgctacgctggggatg
tcttatcagcagtctcagcaaaaaacgaacttcaccgaaggtcgtgacttcccgtcggac
gcctatcgccagatcgttagcgcggcccgcaaaaccgatggtagctcaacgcagaccgat
tatcgcttcctgtcatacttcgccagagctaattacaaattctctgaccgatacctgctg
ggggtaagtgcccgtgtcgatgggtcgtcacgatttggtcgcaatagccgctacggcttt
ttcccggcagtttcggccggttgggtattatcggaagaaagcttcctgaaaaataacaat
accatcagttttctgaagctccgctccagttatggccggacaggtaatgccgaaattcag
aacttcccgcaattaggtctgtttacgggcgatgccaattatggctcattacccggtcag
cgtccgtcacagctggccaaccccgatctgaagtgggaaacgaccaaccaatttgatatt
ggtcttgatttcgggattctcaacaaccgtattaacggcgaaattgactactataacaag
caaacaacaggcttactgctgaacgtaaacgttccgggtacaactggttttgctacacaa
ttccggaacgttggtagcctggaaaacaaagggtttgaatttgtattgaataccgaaaac
ctgacgggtgctttccggtggacgacaagcttcaatgctgctaccaaccagaacaaaatc
accaatctacagggacaaattattgaaggtggtatcaacgccatgagccgtgccgttgaa
ggacaaccgctgggtgtattcttcacgcaggagtacgcaggtgttgatccggcgaatggc
gatgcgctctggtataaaaatacggcgaatcctgatggatcattagatcgcacgacaacg
aatgtctacagtcaggcccagcgtgtcgtgaagggaagtccactacctaaatggactggc
ggtatcaccaacacctttagctacaaaggcattacattgagcgtgctattcaacggcgta
tttggcaataagatcaacttctatggtgttggccgctactcgtcggcaaatggtcgtttt
gaagataaccagaccgtcgatcagttagacgcctggacaactcaaaacaccaatacgaac
gtaccggaagcccgtttgtattataacaacggcgctcaatcgtcgagccgatttattctc
gacggttcatttgtccggctgcgcacggctacattatcgtacaacttaccaaaaacactg
atcaatcgggtgaaattgaatagtgtacgtttcttcgtaacgggtcagaacctcctcacc
ttcacgaagtatgcgggctgggacccagaagtaaatgccgattatatcgtatcgaacatc
gctcagggctatgatttctataccgcaccacaagctcgtacgatcaccggcggaattaac
atcggtttctaa
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