Spirosoma endbachense: GJR95_24910
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Entry
GJR95_24910 CDS
T09865
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
senf
Spirosoma endbachense
Pathway
senf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
senf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GJR95_24910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
senf03021
]
GJR95_24910
03400 DNA repair and recombination proteins [BR:
senf03400
]
GJR95_24910
Enzymes [BR:
senf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GJR95_24910
Transcription machinery [BR:
senf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GJR95_24910
DNA repair and recombination proteins [BR:
senf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GJR95_24910
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
Methyltrn_RNA_3
Motif
Other DBs
NCBI-ProteinID:
QHV98050
UniProt:
A0A6P1W238
LinkDB
All DBs
Position
complement(6168700..6169689)
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AA seq
329 aa
AA seq
DB search
MSILAFQMPDKVVVEKADDFHGVFEFKPLEKGYGVTIGNALRRILLSSLEGYAITSVKFP
GVLHEFSSIEGVVEDVTEIILNLKMVRFKKISDMVDNKITVNIKKQSVLKAGDISKFSPS
FEVLNPELEICHIDDTRDLEMEIFVEKGRGYVPADEPRANELPFGHIPIDAIYTPIKNVK
YSVENTRVEQKTDYERLLLDIETDGSIHPEEALKGAAYILIQHFMLFSDQTMTFETTKPE
EENVVDEEVLHMRKLLKTSLADLDLSVRAYNCLKSADVRTLGDLVRLEISDMMKFRNFGK
KSLTELEQLVAEKNLTFGMDVAKYRLDED
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgtcaattttagcgttccaaatgcccgacaaagtcgtagtggagaaagctgacgacttt
cacggggtgtttgaattcaaaccccttgaaaaaggatacggtgtaacaatcggcaatgcg
cttcggcgtattttgctgtcatcgctggaaggttatgcgatcacaagcgtaaaatttccg
ggtgtgttgcacgaattttcttcaatcgagggtgtggttgaagacgtgactgaaatcatt
ctgaaccttaaaatggttcgttttaagaagatttcagacatggttgacaacaaaattacg
gtcaacatcaagaagcaatcagtcttaaaggctggtgatatatccaaattctcgccatca
ttcgaggtgctgaatccagaactggaaatctgccacatcgatgatacacgggatctggaa
atggaaatcttcgtggaaaaaggtcgtggctatgttccggctgatgaaccacgggcgaat
gaacttccgtttggccatatacccatcgatgctatttatacgccaatcaaaaacgtaaaa
tatagcgttgaaaacacacgggttgagcagaaaacagattatgagcgtcttttactggac
atcgaaacagatggttcgatccaccccgaagaagcgctgaaaggtgcagcttatattctg
attcagcacttcatgctgttctcggatcagacgatgacgtttgaaacgacgaagcctgaa
gaagaaaacgtggtcgatgaagaagtactgcacatgcggaaactgctcaaaacctcgttg
gctgacctcgacttgtctgttcgtgcttacaactgcctcaagtcggctgatgtgcgcaca
ttgggtgatcttgttcggttagaaatttcggacatgatgaaattccgcaacttcggtaag
aagtcattgacggaattggaacaactcgttgcggaaaagaacctgacgttcggtatggac
gtcgctaagtacagattagacgaagactaa
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