Spirosoma endbachense: GJR95_25770
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Entry
GJR95_25770 CDS
T09865
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
senf
Spirosoma endbachense
Pathway
senf03420
Nucleotide excision repair
senf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
senf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GJR95_25770
03430 Mismatch repair
GJR95_25770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
senf03400
]
GJR95_25770
Enzymes [BR:
senf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GJR95_25770
DNA repair and recombination proteins [BR:
senf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GJR95_25770
MMR (mismatch excision repair)
Other MMR factors
GJR95_25770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
Viral_helicase1
AAA_11
ResIII
DUF3553
Motif
Other DBs
NCBI-ProteinID:
QHV98198
UniProt:
A0A6P1W0T1
LinkDB
All DBs
Position
6350735..6353029
Genome browser
AA seq
764 aa
AA seq
DB search
MVDYISGLNDPQREAVMHGDGPLMIIAGAGSGKTRVLTYRIAHLIENGVDPFRILSLTFT
NKAAGEMRHRIEKVVGTEARNIWMGTFHSVFAKILRIEAKAIGYTSNFSIYDTDDSKSLL
RSIIKEMALDDKVYRVNSVFGRISGAKNRLIGPDDYINNAVIQADDEGARMPHIGRIYKQ
YAIRCFAANAMDFDDLLFNTNVLFRDHLDILNKYQHKFQHVMVDEFQDTNVSQYLITRKL
AAVHQNICIVGDDAQSIYAFRGANIENILNFQRDYGKENVKIVKLEQNYRSTKTIVQAAN
SIISRNKNQLEKHVFTDNEEGSLIEIIKASSDNEEGRLVASSIFEAKMNGSLTNNDFAIL
YRTNAQSRAFEEALRKVSIKYRIIGGLSFYQRKEIKDLIGYLRFTVNQQDEEAFKRIINL
PKRGIGDTTVAKISVIAAEKEDSIWEIVADIGKHIAGRSTFAIESFATLIKSFKLLLDQK
DAFEVASHIAKTSGLLKELYDDKTVEGLARYENVQELLNAIKEFVDNPDNEDKTLSAFLQ
SVSLLTTADEKEDDGDNDKVTLMTIHAAKGLEFKNVHIVGLEEDLFPSQMMLESRNDLEE
ERRLFYVAVTRAEKRLTMSYAETRYHYGRLKMCEPSRFLLEMDQQYLKVSKQRSAPSRLD
FDRPERDKSESTSTGSMSFVRSLAQKTARSQTPQSAASHTPSPDFAPTSTADLAAGQRVE
HAKFGFGTVKNVDVNGTERKATIQFETAGEKVLLLSFAKLRVVG
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atggttgattacatttctggattgaatgacccccagcgggaagccgtgatgcacggcgat
ggaccgctgatgattatagctggtgccggttcgggcaaaacacgcgttctgacgtatcgt
attgcccacctgattgaaaatggtgtagatcctttccggattctgtcactgacgtttacc
aataaagcagccggtgagatgcgtcatcggatcgaaaaggttgttggcacagaagcgcgt
aatatctggatgggtacattccactccgtattcgccaaaattctgaggatcgaagcaaaa
gccatcggctataccagcaatttttccatctatgacaccgacgactctaagtcgctgttg
cgtagtattattaaggaaatggcgctcgacgacaaggtttaccgcgtcaatagcgtcttc
gggcggatttcgggcgctaaaaaccggctcattggtcccgacgattacattaacaatgcc
gtgattcaggcagacgatgagggtgcccgaatgcctcacattggtcgcatttacaaacag
tatgcaattcgttgctttgcggccaacgccatggatttcgacgatctgttgttcaatacc
aatgtgctgttccgtgaccatttagacattctgaacaaataccagcataagtttcagcat
gttatggtcgatgagtttcaggataccaacgtttcgcaatacctgatcacacgcaaactg
gcggctgttcaccagaatatctgtattgtcggtgacgatgcccagagtatttatgcgttc
cggggcgctaacatcgaaaatatcctcaactttcagcgcgattacggtaaagaaaacgtc
aaaattgtcaagcttgagcagaactatcgttccaccaaaaccattgtgcaggcggcaaac
tccatcatttcccgcaataagaaccaacttgagaagcacgttttcaccgataatgaagag
ggttcattgatcgagattatcaaagcatcgtcggacaatgaagaagggcggctggtggct
tcgtcaatttttgaggccaagatgaacggatcgctcacaaacaacgattttgcgattctc
tatcggactaacgcgcagtcgcgggcgtttgaagaagcgcttcggaaggtgagcatcaag
tatcgaattattggcggcctgtctttctaccaacgcaaggaaatcaaggatctgattggc
tatcttcggtttacggtcaatcagcaggacgaagaagccttcaaacggattataaacctg
cccaagcgcggcattggcgatactaccgttgccaaaatcagtgtcatagccgccgaaaaa
gaggattcgatctgggaaattgtagccgacattggtaagcacattgccggacggtcgact
ttcgctatcgaaagctttgctaccctgattaagagcttcaaactacttctcgaccagaaa
gatgcctttgaagttgcttcacacattgccaaaacgtcgggtttgctgaaggagttatat
gacgataagaccgttgaagggctggctcgttacgaaaacgttcaggaattgctgaatgcc
attaaggaatttgtcgataatccagataacgaagacaaaaccctcagcgcatttctgcaa
tcggtctcgctgttgacaacggccgacgaaaaagaagacgacggcgacaatgacaaggta
accctgatgaccattcacgcggctaagggactcgaattcaaaaatgtccacattgttggt
ctggaagaggatctgttcccgagtcagatgatgctcgaaagccgcaatgatctggaggag
gaacggcgtctgttttacgtggccgttacgcgtgccgaaaaacgactgaccatgtcttat
gccgaaacccgctatcattacgggcggctgaagatgtgtgaaccgagccggtttctgctg
gaaatggaccaacagtatctgaaagtgtcaaagcaacgttcggcccccagccggctggac
ttcgatcgtccggagcgggataagagcgaaagcacatcgactggttcgatgagttttgtg
cggtcgctggcgcagaaaaccgcccggtcacaaactcctcaatcagctgcctcgcacacg
ccttcgcccgattttgcgcctaccagcacggcagatcttgcggctggccaacgtgttgag
catgctaaatttgggtttggaacggtgaaaaatgtagatgttaatggtaccgaacgtaaa
gcgaccatccagtttgagaccgccggtgagaaagtgctgttgctgagctttgcgaaacta
cgggtggtggggtag
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