Spirosoma endbachense: GJR95_26120
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Entry
GJR95_26120 CDS
T09865
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K21686
XRE family transcriptional regulator, fatty acid utilization regulator
Organism
senf
Spirosoma endbachense
Brite
KEGG Orthology (KO) [BR:
senf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
senf03000
]
GJR95_26120
Transcription factors [BR:
senf03000
]
Prokaryotic type
Helix-turn-helix
XRE family
GJR95_26120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_3
HTH_19
HTH_31
Peptidase_M78
HTH_26
HTH_25
ScfRs
HTH_73
Motif
Other DBs
NCBI-ProteinID:
QHV98263
UniProt:
A0A6P1VYN6
LinkDB
All DBs
Position
complement(6429451..6430950)
Genome browser
AA seq
499 aa
AA seq
DB search
MTTDREKVRLIFGLKIKQLRNDLGLSTYELADRTGLSPSYLNEIEKGKKYPKTEKIFALA
KALNSNYDTLVSLQVSKSLEPVVELLNSNILTELPLDLFGIEPGYFLEVMATAPAKLSAF
INTLIEIGRNYDLSVEQFYFSALRTYQAMHNNYFEELEKQADTFLTDYPRPELPGQYGNW
LIRVLNEVYGCTVDFYDETTQPALMSLRSVYLPEQQKLLVNSELSIEQQVFTLSREVGYH
WLGLTIRPLESSVLEARSFDEVLHNFQASYFARCILIPRQQLLDKLRIMVQQPDWDNERM
LQMLAQFTVTPEMFLLRVTNLLSGYFGLNNLFFLRFNQLLNGRFIMAKELHLSKLHTPHG
IARDEHYCRRQMSVTILNELRQLQESGQWDGQPICRAQRISFVTNNTTYFVFSIAKSSPP
TPDNSSINIGFPIDETLLEKIPFIGDPKLPTVQVGETCERCPIADCTVRAAPPTVLSHQQ
RMKTIQATIEQLRAASSGK
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgacaaccgaccgggagaaagtaaggctcatttttggcctgaaaatcaagcagctacgt
aatgatctgggcttatcgacctatgaactcgccgaccgaacaggtttatcaccatcgtac
ctgaacgaaatagaaaaagggaagaaatacccgaagaccgagaagatatttgctttagcc
aaagcactcaatagcaattatgatacccttgtatcgcttcaggtcagcaagtcgctggaa
ccggttgtagaactacttaactccaacatactgaccgaattaccattagatctgttcggt
attgagccaggctattttctagaagtgatggccactgccccggcgaagctgagcgcattt
atcaatacactgatcgaaatcgggcggaattacgatctgagtgtcgagcagttttatttt
tcggccctacggacataccaggccatgcacaataattatttcgaggaactcgaaaagcag
gcagacaccttcctgaccgattacccgcggcctgaattgcccggccagtatggcaactgg
ctgattcgggttctgaatgaggtatatggctgcaccgtcgatttttacgacgaaaccacg
cagcctgctctgatgtcgcttcgatcggtctacctgccagaacaacaaaagttgcttgta
aacagcgaattatccattgaacaacaagtctttacgctgtcgcgggaagtaggttatcac
tggctcggactaaccatccgaccgctcgaatcatctgtactggaagccagatcgttcgat
gaagtgctgcataacttccaggcgtcttacttcgcccgctgcattctgattccccggcag
cagctactcgacaaactaaggataatggtgcagcaacccgattgggacaacgaacgaatg
ctacagatgctggctcagtttacagtgacgccggagatgtttctgctgcgggttaccaat
ctactatcgggttatttcgggctaaataatttgttttttctgcgcttcaatcagttactc
aatggccggtttattatggccaaggaattgcacttgagcaagttgcatacgccacatggc
atcgcccgcgacgaacattattgccgcagacagatgtcggtaacgattctgaacgaactt
cgtcagcttcaggaatcggggcagtgggatggacaacctatctgccgggcgcagcgcatt
tcattcgtgaccaacaacacgacgtattttgtcttttcgatcgccaaatcgtcgcccccc
acccctgataatagcagcattaatattggctttcccatcgacgaaacgctgctcgagaag
atcccctttatcggcgacccgaagttaccaaccgttcaggtaggcgaaacttgtgagcgt
tgtcctatcgctgactgtaccgtgcgggccgcccccccgactgtactgtcgcaccagcaa
cggatgaagactattcaggctacaatcgagcaactccgtgcggcatcgtctggcaaatga
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