Spirosoma endbachense: GJR95_30100
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Entry
GJR95_30100 CDS
T09865
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
senf
Spirosoma endbachense
Pathway
senf03030
DNA replication
senf03430
Mismatch repair
senf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
senf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GJR95_30100
03430 Mismatch repair
GJR95_30100
03440 Homologous recombination
GJR95_30100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
senf03032
]
GJR95_30100
03400 DNA repair and recombination proteins [BR:
senf03400
]
GJR95_30100
Enzymes [BR:
senf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GJR95_30100
DNA replication proteins [BR:
senf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GJR95_30100
DNA repair and recombination proteins [BR:
senf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GJR95_30100
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
QHV98998
UniProt:
A0A6P1W373
LinkDB
All DBs
Position
7421820..7422365
Genome browser
AA seq
181 aa
AA seq
DB search
MYCIVDVETTGGVKGPTRLTEIAIFRHDGLQVVDSFHSLVNPECPIPPFIRHLTGISDEM
VQEAPLFADIAEQVLRITHDAVFVAHNVGFDFNFIKKELEWLGYDYFRRTLCTVRTSRKV
FPGFPSYSLGKLCNSLSIPLNNRHRAQGDAAATVRLFEMLLQHDAHGLIPRNGGASIAVH
D
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
gtgtattgtatcgttgacgtcgaaactactggaggggtaaaaggcccaacccgacttacc
gaaattgctatcttccgccatgatgggctgcaagttgtagactcgtttcattcgctggtg
aaccctgaatgtccgattccaccatttattcgtcacctgaccggtatttccgatgagatg
gttcaggaagcgccactgtttgccgacatcgccgagcaggttcttagaattacacacgat
gctgttttcgttgcccataatgtagggtttgattttaacttcatcaaaaaggagctggaa
tggctcggctatgattattttcgtcggacgctttgtactgtacggacaagccgaaaagtt
tttccaggatttccatcgtatagccttgggaaactctgtaactcgctcagcattccgctc
aacaatcgtcaccgagcgcagggtgatgcggccgctacagttcggcttttcgaaatgcta
ctccaacatgatgctcacggattgattccccgcaacggtggtgcgtcgattgcggttcat
gattaa
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