Spirosoma endbachense: GJR95_30570
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Entry
GJR95_30570 CDS
T09865
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
senf
Spirosoma endbachense
Brite
KEGG Orthology (KO) [BR:
senf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
senf03400
]
GJR95_30570
DNA repair and recombination proteins [BR:
senf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GJR95_30570
Archaeal homologous recombinant proteins
GJR95_30570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_21
AAA_29
DUF4998
ABC_tran
MenC_N
Motif
Other DBs
NCBI-ProteinID:
QHV99087
UniProt:
A0A6P1W4Z5
LinkDB
All DBs
Position
complement(7546040..7549129)
Genome browser
AA seq
1029 aa
AA seq
DB search
MIPIKLSIQGLYSYQELQEIDFQQLIGSSVFGIFGKVGSGKTSLLEAISFALYGETERLN
SRDNRQYNMMNLKSKHLLIDFEFQAGPEQQRYKFIYEARRHPKKHHEIMPGERRMFIWQE
NDWQPVGNEKEDVALLSKQILGLDYDNFKRTIIIPQNQFREFLELSPTERTKMMNQLFKL
DQYDMAGRVGKLNKENDDQLSELRGLLAPLGDVTPEAIEQAKTSITVVLESLAQKETEIN
QLLPDEKRLIESQNRSKLLASHQQELTQLLIQQEQYQRLEADIALYETCLLIFQSDFAIF
DKLASKQLKLTETEQNARQQLSVAGKRRASLVSLYDAAKKAYETRDELQQKIDELDTVQQ
IRTLQQSISQQIHNRDTLASQLEQQTSQLDHYKADRTKHQLVLDNGLGQTSNLERLYKVN
NWFTAYKPLKKQADDLQAALNNYDLAVEKLKQRKNDALAGFPVDWAQLTLKTLPDQIEDA
LAQLKLIREDRETKHRQLLVQDELRKYADALTDGKPCPLCGSEHHPNRHIGNAEDTEVQR
SDAALRKVVQRIDDTTTLQLTIKELATKLRSELENGKRLTQERTEIVGQLTAHEDAFVWP
EFSKEQEGLVIEAMRQESDGQKQLQDAQQAVRELNKLTEETEIIYKELARKVAEADNDLS
GLNGQLKTAAESLEHFRLDEVKQWGLDQIADLRESLYRTYKQTKINFDDADKQKSSAEKE
LATLEEQIQQVNIQLAEVSQESKTLETTINLNLDAQGLNREQVNQILQSGIDVSREKRRI
NDYNEKRTGLQKQVETLEAELAEHPFDPAALTAVQQKLTVLQAEKDELNKEHGRATTILA
TLEAQWQQKQDHQKRHDELDLRRQDLKKMDELFRAQGFVNYVSSVYLKNLCESANERFFK
LTNNQLKLELDDKNGFQVRDYLNGGEVRSVKTLSGGQTFQASLSLALALSDNIQHLTKAK
QNLFFLDEGFGTLDKDSLQTVFKTLKALRSENRVVGIISHVEELQQEVDNFIRAESTENG
SRIVRSWDI
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgatacccattaagctgtcaattcagggactttattcgtaccaggaattacaggagata
gattttcagcagttaatcgggtcgagtgtatttggcatattcggcaaggtcggcagtggt
aaaacgtctttgctggaagccattagttttgctttgtacggtgaaaccgagcgacttaat
agccgcgataatcgccagtacaatatgatgaatctgaagtcgaagcatttgctcatcgac
ttcgaatttcaggccgggcccgagcagcaacgctataaattcatttatgaagcccgacga
caccccaaaaagcatcatgagattatgccgggcgaacgtcggatgtttatctggcaggaa
aacgactggcagccggttgggaatgaaaaggaggatgtcgccctattgtcgaagcagatt
cttggcttagactacgacaattttaagcgaacgatcatcattccacaaaaccagtttcgg
gagtttctggaactcagcccaacggagcgcacaaagatgatgaatcagttattcaaactg
gatcagtacgatatggctggtcgagttgggaaactgaacaaagagaatgatgatcagctt
tcggaattacgcggtttgctggctcctctgggcgatgttacacccgaagcgattgagcag
gccaagaccagtattacagtcgtcctggaatcattggcccaaaaggaaacggaaatcaac
cagttgttgcccgatgaaaagcgactgatcgagagccagaatcgaagcaagctcctggca
tcccaccagcaggaacttactcaactccttatacaacaggaacaataccagcgtcttgag
gccgatatcgccttgtatgagacctgtttgttaattttccagtctgactttgccattttc
gacaaattagccagtaaacaacttaagctaacagaaacggaacaaaatgcccgtcaacaa
ctcagtgtcgcaggcaagcgtcgggcgagtttagtgagtctgtatgatgccgcgaaaaaa
gcatatgagactcgtgatgaactgcaacagaagattgatgaattagatacggtgcagcaa
atcaggacgttgcagcaatcaattagtcagcaaatacataaccgggacacactagccagc
cagcttgagcagcaaaccagccagcttgatcactataaagctgaccggactaaacatcag
cttgtactggataatggacttgggcaaacgtcgaatcttgaaaggctttataaagtaaat
aactggttcacagcttataaaccgctaaaaaaacaggctgacgatttacaagctgccctt
aacaactatgatctggccgtagaaaaactaaagcagcgtaaaaacgatgcattagctgga
tttcctgtcgactgggctcagttgacgcttaaaacattacctgatcaaattgaggacgcc
ctcgcacaactgaaactaattcgggaagaccgggagacaaaacatcggcaactattggtt
caggatgagcttcgtaagtatgctgatgcactaaccgatggcaaaccatgccctttatgt
gggtcagaacaccacccgaatcggcatataggaaacgcagaagataccgaggttcagcgc
agtgatgcggctttgcgaaaagttgtccaacgaattgacgacacaacaacgcttcaacta
acaataaaagaactggcaacgaagctacgtagtgagttggagaatgggaagcggcttacg
caggaacgcacggaaatagtcgggcaattgacagcccatgaagatgcgtttgtgtggccg
gaattctcgaaagagcaggaaggcctggtcatagaggctatgaggcaggaaagtgacggc
caaaaacagcttcaggacgcacagcaggctgttcgggaactgaacaaactcaccgaagaa
accgaaattatctacaaagaactggcccgcaaagttgccgaagcagataacgacctttcg
ggcttgaatggtcagttgaaaacagccgccgaatcgctggaacactttcggctcgacgaa
gtaaaacaatggggtctggatcagattgccgacctgcgcgagtcgctttatcgcacgtac
aagcagacaaaaatcaatttcgacgatgctgataaacagaaaagcagcgccgaaaaagaa
ctggcgacactggaggagcagattcaacaagtcaatatacagctagccgaagttagtcag
gaaagcaaaacgctggaaacgacgatcaacctgaatctggacgcccaggggttgaatcgg
gagcaggtgaatcagatcctacagtccggaatagatgttagccgggaaaaacggcgaatc
aacgactacaatgaaaagcgaacaggcttacagaaacaggtggaaaccctggaggcagaa
ttagccgagcaccccttcgaccctgctgcgctgacggccgttcaacagaaactcacagta
ttgcaagccgaaaaagatgaattaaacaaagagcacgggcgcgcaaccaccatattggcc
acgctcgaagcccaatggcagcagaaacaggatcatcagaagcgccatgatgagctggac
ctccggcgacaggatttaaagaaaatggacgaattattccgggctcagggcttcgtcaac
tatgtttcgtcggtctacctcaaaaacctgtgtgaatcggccaatgagcgttttttcaaa
ctgaccaataatcagttgaaactggagctggacgataaaaacggctttcaggtgcgcgac
tacctcaacgggggtgaagtcagaagtgtgaaaacgctctccggcggtcaaacatttcag
gcctcgttgtcgcttgcgcttgccctgtcagacaatattcagcacctgaccaaagccaaa
caaaatctgttttttctggatgagggcttcggaacacttgataaagattccctacagaca
gttttcaaaaccttaaaagctcttcgttccgaaaaccgggttgtcggtattatttcacac
gttgaagagcttcagcaggaagttgacaatttcattcgtgctgaatccacagaaaacggg
agtcgtattgtacggagttgggatatataa
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