Spirosoma endbachense: GJR95_30575
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Entry
GJR95_30575 CDS
T09865
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
senf
Spirosoma endbachense
Brite
KEGG Orthology (KO) [BR:
senf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
senf03400
]
GJR95_30575 (sbcD)
DNA repair and recombination proteins [BR:
senf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GJR95_30575 (sbcD)
Archaeal homologous recombinant proteins
GJR95_30575 (sbcD)
BRITE hierarchy
Motif
Pfam:
Metallophos
Metallophos_2
SbcD_C
Metallophos_3
baeRF_family2
Motif
Other DBs
NCBI-ProteinID:
QHV99088
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All DBs
Position
complement(7549126..7550352)
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AA seq
408 aa
AA seq
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MKIVHTADWHLGKRLQDFQRLQEQQNVLDEIVQIADQEQADLVVVAGDLFDTFNPDPKAE
DLLYSTLKKLTAGGSRPVVAIAGNHDNPDRIEAQDHFGRECGIIFAGFPKTEVRSYELSC
EAKLLRSAPGFIELKLPRHDAPVRIILTPYANETRMRAYFGQTSFGDELRQQLQEHWAAL
ANTYMDKQGVNLLTTHLFVMKRGGEQPEESDDERSILQVGGASVVYTDMIPPQIQYTALG
HLHRYQEIAGGPSPVIYSSSPLAYSFAESDQQKFVVLIEAKPGQAVTVTPVPLKTGKRLL
RPRFKRVDEAVDWLKQNPDCYAEITLQTPTYLTSEERRELQQAHDSLVTIIPDVRDVKST
QKETAPAIDLTQSMETLFADYFKSKNKGQEPNERLQQLFKEILATESE
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatagtacatacggccgattggcatcttgggaaacgactccaggatttccaaagg
ctccaggagcaacaaaatgtattggatgagattgttcaaatcgctgatcaggaacaagcc
gatctggtagtagtggctggcgacttgttcgatacctttaatccagaccctaaggcagaa
gacttattatatagtacgctcaagaaattgacggcgggcggtagcaggccagtagtcgct
attgccgggaatcacgataatccggatcgtatagaagcgcaagaccattttgggcgtgag
tgcggtattattttcgcgggattccccaaaactgaagttcgatcttacgaattaagctgt
gaagcaaagctgttgcgctctgcgcctggctttatcgagttgaaacttccccgccatgat
gccccggttcggataattcttacaccctatgccaatgagacccgaatgcgggcttatttt
gggcagacaagctttggcgacgaactccggcaacaacttcaggagcattgggctgccctt
gcgaatacctatatggataagcagggtgttaatttactgacaacccatttgttcgttatg
aaacgtgggggtgaacaacccgaggaatcagatgacgagcgtagtattctacaggttggt
ggtgcatcggttgtgtataccgacatgattccaccgcaaattcaatatacagcgcttggg
catttacaccgttatcaggaaattgcaggagggcctagtcctgttatatatagtagcagt
ccattggcttatagctttgccgagtctgaccagcagaaatttgttgtgttgatagaggct
aaaccaggccaggccgtaacggtgacaccggtacctctaaaaacgggcaaacggctttta
cggccccgttttaaacgagttgacgaggctgtcgactggcttaaacagaatcctgactgc
tatgccgaaattactctacaaacgccaacctacctgaccagcgaagagcgtagagaactt
caacaggcgcatgactcactggtaacgatcataccagatgtaagagacgttaagtcgacg
caaaaggaaacagcaccagctattgaccttacgcagagtatggaaacgttgtttgcagac
tattttaaaagtaaaaacaaaggccaggagccgaacgagcggcttcagcagttgtttaaa
gagattttagcaaccgaatctgaatga
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