Spirosoma endbachense: GJR95_32040
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Entry
GJR95_32040 CDS
T09865
Name
(GenBank) RNA-binding protein
Organism
senf
Spirosoma endbachense
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GFIT
Motif
Pfam:
FG-GAP_3
UnbV_ASPIC
FG-GAP
Motif
Other DBs
NCBI-ProteinID:
QHV99361
UniProt:
A0A6P1W1Q5
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Position
7872519..7876091
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AA seq
1190 aa
AA seq
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MKFHYVLYLVLVLTSCKNDTLFEAIPSSKSGIQFNNLIAENDSINPLDMVNMYNGGGVGI
GDFNQDGWPDIYFVGNRVASRLYLNKGAQGATFEFDEVTEKAGVDGKGRWGRGVAVVDIN
NDSWPDIYVCNTLTKDSLQRRNLLYVNQKVTNAGVPVFKELAAEYGLDINVQSTMANFFD
YDNDGDLDMYLTVNEASPEQNPNQFGLIRFDGRRSTGRLLRNDWNTAVKHAYFSNVSERA
GMTLDGFGHTATVVDLNQDGWKDISVANDFLSSNILYINNRNGSFTDRSREYFKHTSLNA
MGQDIGDINNDGLADLIELDMNPEDNYRKKMMMMANNYVSYLNFDLHGYQYQYVRNTLQL
NQGPRVGAKDSIGSPAFSEIGFMSGIAQTDWSWTPLLTDFNNDGFRDLIVTNGYPKDVTD
HDFIAYRDQPNETTTKAKILAQIPVVKIHNYAYQNTGELTFRDVTSDWGFAQPTFSNGAV
YTDLDNDGALDIVINNINDEALIYKNTTRERDKENTHFLQLNVVGDSLNVDGLGTVISIH
YAGGKQQVYEHTPYRGYLSTNQMIAHFGLGNVVKLDSVVIKWPNGKKQVLRNVKADQRLT
VSSKNASASYVWTTPELATNSLFTDVTKEVGLTYRHKEFDFIDFNIQKLLPHKLSEYSPG
LAVGDVDSNGTDDLVIGGNAHDPAQLFLQQQNGKFTQRNVVPEQSVPGDYKDEGILLFDA
NGDSALDLYVARGGYKNAPNTPGYQDKLYINDGKGNFAETPNALPVNLTSKLCVRAIDYN
HDGKLDLFVSGRVEPWNYPKPVSSVILRNDSQHGQTKFTDVTRDVAPALINSGLVCDALV
TDFDNDTWLDLILVGEWMPITFLKNTNGRFNSTTETTGVGDKPGWWNSIVAGDFRHTGRM
DYIVGNAGLNTLFKASEQYPVYVTAKDFENNGNYSAIPSLFLPDQDGKLNEFPMHGREDL
IKQMNSVKKKYVNFKSFAGATMGELLSLEQLKGAIRLKATMLQSCFLRNDGNGKFTLIPL
PKQAQISILNGMVVDDYNGDGHLDVAMTGNDYGTDVSIGRYDALNGLLLLGDGRGNFNPQ
SIRQSGLYIPGNGKALVKLRSSQGNYRLIASQNRDVVKAFELKRSVNNIPLTPTDISAQI
QYKNGNTLKQEFTYGSSFLSQSGRFLTIDKDVVEATITDSKGRQRPVKAN
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atgaaattccattacgttctttatttagtattggttctcacgtcctgcaaaaacgatacg
ttgtttgaggccattccatcgtcaaaatcgggtattcagtttaataatctcatcgctgaa
aatgactcgattaacccgttggatatggtcaatatgtataacggtgggggagtgggaatc
ggtgattttaatcaagatggctggccggatatttacttcgttggcaaccgggtggcgagt
cggttgtacctaaacaaaggggcgcagggcgcgacttttgaatttgatgaggttaccgaa
aaagcgggtgtcgatggcaaaggccgatgggggagaggggtggccgttgtcgatattaac
aatgatagctggcccgatatttacgtctgcaatacgcttaccaaagactcgcttcagcgt
cgtaatctgctgtatgtcaatcaaaaagtaacaaatgccggtgtgccggttttcaaggaa
ctggctgcggaatatggcttggatatcaatgtgcaatcgacgatggcgaacttctttgat
tacgacaacgatggcgacctggatatgtacctcacggttaatgaggcctcgccagaacag
aatccaaatcagtttggattgatccggtttgacggccgacgtagcacagggcgtctgctg
cgtaacgactggaatactgcggtaaagcacgcctactttagtaacgtatcggagcgggcg
ggcatgaccttggatggcttcgggcacacggccacggtggtcgatctcaatcaggacggc
tggaaagatatttcggtggcgaatgatttcctatccagcaatattctctacatcaacaac
cgaaacgggagttttaccgaccgctcccgcgagtacttcaagcatacgtcgctcaacgcg
atggggcaggacatcggcgacatcaacaacgacggattggccgatctaatcgaactggac
atgaatccggaagacaattaccggaagaaaatgatgatgatggcgaataattacgtcagt
tatctcaacttcgatctacacgggtatcagtatcaatacgttcgaaacacgctgcaactc
aatcaggggccgcgcgttggggcgaaagattcaattggtagtccggccttcagtgaaatc
ggtttcatgagcggcattgcccaaaccgactggagctggacgcccttactgactgatttc
aataacgacggttttcgggatttgatcgtcaccaacggctacccgaaagacgtaaccgac
catgatttcatcgcctatcgggatcagcctaacgaaacgaccacgaaggccaagatttta
gcccaaattccggtcgtcaagattcacaattacgcctatcaaaataccggtgagctgact
tttcgggatgttacgtcggactggggctttgctcagccaacgttttccaacggcgcggtc
tacaccgatctggataacgatggcgcactggatatcgtcatcaacaacatcaacgacgaa
gcgctaatttataagaataccactcgcgaacgggataaagaaaatacgcatttcctgcaa
ctgaacgtagtgggcgatagcctgaacgtcgatgggttgggcacagtcatttccattcat
tatgcaggtggcaaacagcaggtgtatgagcatacaccctaccgggggtatctgtctaca
aaccagatgattgctcattttggcctcggtaacgtagtaaaactcgactctgtcgtcatt
aaatggccaaatgggaaaaagcaggttctgcgaaacgtcaaagccgatcagcgattgacg
gtgtccagtaaaaatgcgtccgcaagctacgtctggacaactccagaactggcgactaat
tccctgttcaccgacgtaacaaaggaggttggtttaacgtaccggcacaaggagtttgat
ttcatcgactttaacattcagaaattattgccgcataaactatcggaatacagccccggt
ctggcggttggcgatgtggacagcaatggcacggatgatctggtgatcggcggaaacgcc
cacgatccggcgcagctttttttgcagcaacaaaacgggaaattcacgcaacgaaacgta
gtgccggaacagtctgttccgggcgattacaaagacgaaggcatcctgctttttgacgcc
aatggcgattcggcattagatctgtacgtcgcccggggtggctataaaaatgcgcccaac
acgcccggctatcaggacaaactatatatcaatgatggcaaggggaatttcgcggaaacc
cccaatgctttaccggttaatctgaccagcaaactctgcgttcgtgccattgactataac
catgatgggaaactggatttgtttgtgtcggggcgggtggaaccctggaattatcccaaa
cccgtgtccagcgttatcctgcgaaacgacagccagcatggacagaccaaattcaccgac
gtaacgagggacgtagcacccgccctgatcaatagtggcctggtgtgcgatgcgttagtc
actgattttgacaatgatacctggcttgatttaattctggttggcgaatggatgcccatt
acgtttcttaagaacacaaacggtcgcttcaattccaccaccgaaacaaccggcgttggc
gataaaccgggctggtggaatagcattgtcgcgggcgattttcggcatacgggcagaatg
gattacattgtgggcaatgcgggcctgaacaccctgtttaaggcgagtgagcaatatcca
gtatacgtaacggccaaagattttgaaaacaatggcaactactcggccattccgtccctg
tttttgccggatcaggatggcaagctcaacgagttcccgatgcacggccgggaggatttg
atcaagcagatgaacagcgtcaaaaagaagtatgtcaacttcaaatccttcgccggagcc
acgatgggcgagctactttctctcgaacaactcaaaggcgccattcgcctgaaagccacc
atgctacaatcctgttttcttcgtaacgacggcaatggaaaattcacgcttataccgcta
cctaaacaggcccaaatttccatcctgaacggcatggtggtcgatgattacaacggcgat
ggccatctggacgtcgccatgacgggcaacgattatggcaccgacgtttcgattggtcgg
tatgatgcgctcaacgggttactattactcggcgatgggcgtggcaatttcaacccgcag
tcaattcggcaaagcggcctgtacattcccggtaacggaaaagcgctggtcaagttacga
agcagccagggcaactatcggctgatcgccagccagaatcgggacgtagtcaaggcgttt
gagttgaaacgcagcgtcaacaacattcccttaacccctacggatataagtgcccaaatt
cagtacaaaaacgggaatacgctgaagcaggaattcacctatggttcgtcctttctgtcg
caatccggccggtttctcacgattgataaggacgtagtagaggctacaattactgacagt
aaaggccggcaacggccggtgaaagccaattaa
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