Spirosoma endbachense: GJR95_38855
Help
Entry
GJR95_38855 CDS
T09865
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
senf
Spirosoma endbachense
Pathway
senf00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
senf00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
GJR95_38855 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
senf01007
]
GJR95_38855 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
senf03016
]
GJR95_38855 (lysS)
Enzymes [BR:
senf01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
GJR95_38855 (lysS)
Amino acid related enzymes [BR:
senf01007
]
Aminoacyl-tRNA synthetase
Class II (A)
GJR95_38855 (lysS)
Transfer RNA biogenesis [BR:
senf03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
GJR95_38855 (lysS)
Prokaryotic type
Other AARSs
GJR95_38855 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
DUF4332
DUF4651
Methyltransf_23
NDUFB10
Motif
Other DBs
NCBI-ProteinID:
QHW01611
UniProt:
A0A6P1WCM4
LinkDB
All DBs
Position
complement(9688847..9690616)
Genome browser
AA seq
589 aa
AA seq
DB search
MLLSEQEINRRQKREELIRMGIDPYPAELFDVTTTIADIRAAFDKGPGTEIAPEMDLSGD
ERWGNVQLAGRLMGFRIMGSASFAEIQDSTGRLQFYFRRDDICPGEDKTLYNTVFKKLLD
IGDIIGVRGHVFSTKTGELSVYVNEFKVLNKSLRPLPVVKEVVNEKGEKETFDAFTDAEQ
RYRQRYVDLIVNPHVRDVFVKRTKLVNSIRQFLSQKGYLEVETPILQPIHGGAAARPFRT
HHNSLDMTLYMRIANELYLKRLIVGGYDGVFEFAKDFRNEGMDRTHNPEFTQVEFYVAYK
DYLWMMDTIEEMVEKVALDVAGTTKVTVGDNVIDFKRPWKRLTMFEAIQEYTGVDVSEME
EAELRQVAEGRGIKVDSTMGKSKLIDELFGDACEPNLIQPTFITDYPVEMSPLTKKHRSK
PGLVERFEAICNGKEIANAYSELNDPLDQRERFEEQLRLAERGDEEAMALDEDFLRALEY
GMPPTAGVGLGIDRLTMIMTNQPSIQDVLFFPQMRPEKKLEQSDESDFVAAGVPAEWVPA
VQKLGFLTVEQLRTANPNKLFNDLGGVRKKLKLEVPMPNIADVRSWTGQ
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgctactgagcgaacaagagataaaccgccgacaaaaacgcgaagaattaatacggatg
ggtattgatccctatcctgctgaattattcgatgtaacaacgaccattgccgatatccgc
gctgctttcgacaagggcccaggaactgagattgcccccgaaatggacctttctggcgac
gaacgctggggaaacgttcagttggctggtcggctgatgggttttcgtattatgggaagc
gcatccttcgccgaaattcaggattctaccggacggcttcagttttatttccggcgcgat
gacatttgccctggcgaagacaaaacgctgtataacacggtatttaagaaactgcttgac
atcggcgatattattggtgtccgtgggcatgttttctcgaccaaaaccggcgaactgtcg
gtttacgtgaacgagttcaaggtattgaataagtcgctgcggcccctgcccgttgtaaaa
gaagtggtgaacgagaaaggcgaaaaggaaaccttcgacgcttttaccgacgccgaacaa
cgctaccggcagcgctacgttgatctgatcgtgaacccgcacgtgcgcgatgtgttcgta
aaacggaccaagctggtcaattcaattcgtcagttcctgagccagaaaggttatctggag
gtcgaaaccccaattcttcagccaattcatggcggagcagcggcacggccattccgtacg
catcacaactcgctcgacatgacgctttacatgcggattgccaacgagttgtacctgaaa
cggctcattgtaggcggctacgacggcgtattcgaattcgcgaaagatttcaggaatgag
ggaatggaccgaacccacaatccggaatttacgcaggtggaattctacgttgcctacaaa
gattatctctggatgatggacaccatcgaggaaatggtcgaaaaagtggcattagacgtg
gccggaacgacgaaagtgaccgttggcgacaacgttatcgacttcaaacgcccctggaaa
cgcctgactatgttcgaggccattcaggaatatacgggtgttgatgtgtcggaaatggaa
gaagcggaactccggcaggtagccgaaggtcgcggaataaaggtcgacagcacaatgggc
aaatcgaaattgatcgatgaactctttggcgacgcctgcgaacccaacctgattcagccg
acattcattaccgactacccggttgaaatgtcgcccttaaccaaaaagcaccggagcaag
ccaggactggtcgaacgtttcgaggctatctgtaatgggaaggagattgccaatgcgtat
tctgagctaaacgacccgctggaccagcgcgaacgcttcgaggagcaattgcgactggcc
gaacggggcgatgaagaagcgatggccctggatgaagattttctgcgggctctggaatat
ggaatgccgccaacagcgggcgttggcctgggcatcgatcggctaacgatgatcatgacc
aaccagccctccattcaggatgtactcttttttccacagatgcgccccgaaaagaaactg
gagcaatcggatgagagtgattttgttgcggctggcgttccggcagaatgggtaccggcg
gtacaaaagcttggtttcctgaccgttgagcaactccgcacggcgaaccccaacaaactc
tttaacgatttggggggtgtacgcaaaaagctcaaactagaagttccgatgccgaacatc
gccgacgttcgtagctggacggggcaataa
DBGET
integrated database retrieval system
