Streptomyces endophytica: OJ254_00480
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Entry
OJ254_00480 CDS
T09208
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
seng
Streptomyces endophytica
Brite
KEGG Orthology (KO) [BR:
seng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
seng03016
]
OJ254_00480 (miaB)
Enzymes [BR:
seng01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
OJ254_00480 (miaB)
Transfer RNA biogenesis [BR:
seng03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
OJ254_00480 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
UZJ29253
LinkDB
All DBs
Position
complement(113254..114771)
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AA seq
505 aa
AA seq
DB search
MTSSTDLSHVVGVPKTYEIRTYGCQMNVHDSERLSGLLEEAGYVRAPKGGEEADVVVFNT
CAVRENADNRLYGNLGQLAPKKAAHPGMQIAVGGCLAQKDRDTIVKKAPWVDVVFGTHNI
GKLPVLLERARVQEEAQVEIAEALEAFPSTLPTRRESAYAAWVSISVGCNNTCTFCIVPA
LRGKEKDRRPGDILAEVEALVAEGVSEITLLGQNVNAYGSDIGDREAFSKLLRACGNIEG
LERVRFTSPHPRDFTDDVIAAMAETPNVMPQLHMPLQSGSDQVLKAMRRSYRQERFLGII
EKVRAAMPDAAISTDIIVGFPGETEEDFEQTLHTVRESRFAQAFTFQYSKRPGTPAAEMD
GQIPKAVVQERYERLVALQEEISWEENKKQVGRTRDVMVAEGEGRKDDATHRLSGRAPDN
RLVHFTRPEEPVRPGDVVTVEVTYAAPHHLLAEGPAKAVRRTRAGDAWEKRTAAPAEKPK
GVLLGLPTIGAPAPSPAPTAGCGCD
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgaccagcagcaccgacctcagccacgtcgtgggcgtgccgaagacctatgagatccgc
acctacgggtgccagatgaacgtccacgactccgagcggctgtccgggctgctggaggag
gccgggtacgtccgtgcgcccaaggggggcgaggaggccgacgtcgtcgtcttcaacacc
tgcgcggtgcgggagaacgccgacaaccgcctctacggcaacctcggccagctcgccccc
aagaaggcggcgcaccccggcatgcagatcgccgtgggcggctgcctcgcgcagaaggac
cgcgacaccatcgtcaagaaggccccctgggtcgacgtggtcttcgggacgcacaacatt
ggcaagctgccggtcctgctggagcgggcccgcgtccaggaagaggcgcaggttgagatc
gccgaggcgctggaggcgttcccctccacgctgccgacccgccgcgagagcgcgtacgcg
gcctgggtgtcgatctccgtcggctgcaacaacacctgcaccttctgtatcgtcccggcg
ctgcgcggcaaggagaaggaccgccggcccggcgacatcctcgccgaggtcgaggcgctg
gtcgccgagggcgtcagcgagatcaccctgctcgggcagaacgtcaacgcctacggctcc
gacatcggcgaccgcgaggccttcagcaagctgctgcgcgcctgcgggaacatcgagggc
ctggagcgggtgcgtttcacctccccgcacccgcgcgacttcaccgacgacgtgatcgcc
gccatggccgagacgcccaacgtgatgccgcagctgcacatgccgctgcagtccggctcc
gaccaggtcctcaaggccatgcgccgctcgtaccgccaggagcggttcctcggcatcatc
gagaaggtgcgcgccgccatgccggacgccgcgatctcgacggacatcatcgtcggcttc
ccgggcgagaccgaggaggacttcgagcagaccctgcacacggtccgcgagtcccgcttc
gcccaggcgttcacgttccagtactccaagcgccccggcacccccgcggccgagatggac
ggccagatccccaaggccgtcgtccaggagcgctacgagcggctggtcgccctccaggag
gagatctcctgggaggagaacaagaagcaggtcggccgcacccgcgacgtcatggtcgcc
gagggcgagggccgcaaggacgacgcgacccaccgcctctccggccgggcgccggacaac
cgcctggtgcacttcacccggcccgaggagccggtccgccccggcgacgtggtgaccgtc
gaggtgacctacgccgctccgcaccacctcctcgcggagggcccggcgaaggcggtccgc
cgcacccgcgccggcgacgcctgggagaagcgcaccgccgccccggccgagaagcccaag
ggcgtcctgctgggcctgcccaccatcggtgccccggccccgagcccggcgcccaccgcg
ggctgcggctgcgactga
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