Streptomyces endophytica: OJ254_00625
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Entry
OJ254_00625 CDS
T09208
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
seng
Streptomyces endophytica
Brite
KEGG Orthology (KO) [BR:
seng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
seng03009
]
OJ254_00625 (rimO)
Enzymes [BR:
seng01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
OJ254_00625 (rimO)
Ribosome biogenesis [BR:
seng03009
]
Prokaryotic type
ribosomal protein modification factors
OJ254_00625 (rimO)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
YajR_YAM
TRAM
Motif
Other DBs
NCBI-ProteinID:
UZJ29273
LinkDB
All DBs
Position
complement(143653..145152)
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AA seq
499 aa
AA seq
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MPERRTVALVTLGCARNEVDSEELAGRLAADGWELVEEAADADVAVVNTCGFVEAAKKDS
VDALLEANDLKDHGRTQAVVAVGCMAERYGKELAEALPEADGVLGFDDYSDISDRLQTIL
SGGVHASHTPRDRRKLLPISPAERQGSAGVALPGHAQAAEAPAAPPEDLPEGIAPASGPR
APLRRRLGSSPVASVKLASGCDRRCTFCAIPSFRGSFISRRPSDVLGETRWLAEQGVKEI
MLVSENNTSYGKDLGDIRLLETLLPELAAVDGIERIRVSYLQPAEMRPGLIDVLTGTDKV
APYFDLSFQHSAPGVLRAMRRFGDTDRFLELLEQIRTKAPQAGVRSNFIVGFPGESEGDL
AELERFLTGARLDAIGVFGYSDEDGTEAASYENKLDPDEVAERLARVSRLAEELTAQRAE
ERIGETVRVLVDRDDEEDGLVGRAAHQAPETDGVTLLSTGQELSPGRMVEAKVVASEGVD
LVAEVLSVDGTSCTEEAAR
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaacgccgtaccgtcgcccttgtcacccttggctgcgcccgtaacgaggtggac
tcggaggagctcgcaggccgcctggcggcggacggctgggagctggtcgaggaagccgcc
gatgccgatgtcgccgtcgtcaacacctgtgggttcgtcgaggccgccaagaaggactcc
gtcgacgccctgctggaagccaatgatctgaaggaccacggcagaacccaggccgtggtc
gccgtcggctgcatggccgagcgctacggcaaggagctcgccgaggcgctgcccgaggcc
gacggcgtgctcggcttcgacgactactccgacatctccgaccggctgcagaccatcctc
agcggcggcgtccacgcctcgcacaccccgcgcgaccgccgcaagctgctgccgatcagc
ccggccgagcggcagggttccgcgggggtcgcgctgcccggtcacgcccaggccgccgag
gcaccggccgccccgcccgaggacctgccggagggcatcgcgcccgcctccgggccgcgc
gccccgctgcgccgccggctcggcagcagcccggtggcctcggtgaagctggcctccggc
tgcgaccggcgctgcacgttctgcgccatcccgtccttccgcggctccttcatctcccgc
cggccctccgacgtgctcggcgagacccgctggctggccgagcagggcgtcaaggagatc
atgctggtctccgagaacaacacctcctacggcaaggacctcggcgacatccgcctgctg
gagacgctgctgcccgagctggcggccgtcgacggcatcgagcggatccgggtcagctat
ctgcagccggccgaaatgcgaccgggtctgatcgacgtcctgaccgggacggacaaggtc
gcgccgtacttcgatctttccttccagcactcggcgcccggtgtgctgcgggcgatgcgg
cgcttcggcgacaccgaccgcttcctggagctgctggagcagatccgcacgaaggcgccg
caggccggtgtccggtccaacttcatcgtgggcttccccggggagagcgagggcgatctg
gcggagctggagcgcttcctcaccggggcccggctcgacgccatcggcgtcttcggctac
tccgacgaggacggcaccgaggccgcgtcgtacgagaacaagctcgatcctgacgaggtc
gccgagcggctggcgcgggtgtcgcggctggccgaggagctcaccgcgcagcgcgccgag
gagcggatcggcgagacggtgcgggtgctggtcgaccgggacgacgaggaggacggtctc
gtcgggcgggccgcgcaccaggcgccggagaccgacggtgtcaccctgctctcgaccggc
caggagctgtcgcccggtcgtatggtcgaagcaaaggtggtggcgagcgaaggcgtggac
ctggtggcggaggtgctgtcggtggacggcacgtcgtgtaccgaggaggcggccagatga
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