Streptomyces endophytica: OJ254_00730
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Entry
OJ254_00730 CDS
T09208
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
seng
Streptomyces endophytica
Pathway
seng03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
seng00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
OJ254_00730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
seng03019
]
OJ254_00730
03016 Transfer RNA biogenesis [BR:
seng03016
]
OJ254_00730
Enzymes [BR:
seng01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
OJ254_00730
Messenger RNA biogenesis [BR:
seng03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
OJ254_00730
Transfer RNA biogenesis [BR:
seng03016
]
Prokaryotic type
tRNA degradation factors
OJ254_00730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
DUF2017
KH_2
KH_KhpA-B
CdsD_C
Motif
Other DBs
NCBI-ProteinID:
UZJ29287
LinkDB
All DBs
Position
complement(174718..176940)
Genome browser
AA seq
740 aa
AA seq
DB search
MENETHYAEAVIDNGSFGTRTIRFETGRLAKQAAGSAVAYLDDDTMVLSATTASKNPKDQ
LDFFPLTVDVEERMYSAGKIPGSFFRREGRPSEDAILTCRLIDRPLRPSFKKGLRNEIQI
VETIMALNPDHLYDVVAINAASCSTQLAGLPFSGPIGGTRVALIKGQWVAFPTHTELEDA
VFDMVVAGRVLPDGDVAIMMVEAEATDQTIQLVKDGAEAPTEEVVAAGLEAAKPFIKVLC
KAQSDLAAKAAKPTGEFPIFLDYQDDVLEALTKAVKDELAQALTIAGKQERETELDRVKG
LAAEKLLPEFEGREKEISAAYRSLTKTLVRERVIKEKKRIDGRGVTDIRTLAAEVEAIPR
VHGSALFERGETQILGVTTLNMLRMEQQLDTLSPVTRKRYMHNYNFPPYSTGETGRVGSP
KRREIGHGALAERALMPVLPTREEFPYAIRQVSEALGSNGSTSMGSVCASTMSLLNAGVP
LKAPVAGIAMGLISQEIDGETHYVTLTDILGAEDAFGDMDFKVAGTKQFVTALQLDTKLD
GIPASVLAAALKQARDARLHILDVMMEAIDTPDEMSPNAPRIITVKIPVDKIGEVIGPKG
KMINQIQEDTGAEITIEDDGTIYIGAADGPAAEAARATINGIANPTMPEVGERYLGTVVK
TTTFGAFVSLLPGKDGLLHISQIRKLAGGKRVENVEDVLGVGAKVQVEIAEIDQRGKLSL
IPVIEEEDAAKEDKKDDADK
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
gtggagaacgagacccactacgccgaagccgtgatcgacaacggctccttcggcacccgc
accattcgcttcgagacgggccgcctggccaagcaggccgccggctccgccgtcgcgtac
ctggacgacgacaccatggtgctgtcggccaccaccgcttcgaagaacccgaaggaccag
ctggacttcttcccgctgaccgtcgacgtcgaggagcggatgtactcggccgggaagatc
cccggctccttcttccgtcgtgagggccgcccctccgaggacgccatcctcacctgtcgc
ctgatcgaccgcccgctgcgcccgtccttcaagaagggcctgcgcaacgagatccagatc
gtcgagacgatcatggcgctcaaccccgaccacctctacgacgtggtcgccatcaacgcc
gcctcctgctccacgcagctggccggcctgcccttctccggccccatcggcggcacccgc
gtcgccctcatcaagggccagtgggtcgccttcccgacgcacaccgagctcgaggacgcg
gtcttcgacatggtcgtggccggccgggtcctcccggacggcgacgtcgcgatcatgatg
gtcgaggctgaggccaccgaccagaccatccagctggtcaaggacggcgccgaggccccc
accgaggaggtcgtcgccgccggcctggaggccgccaagccgttcatcaaggtcctgtgc
aaggcccagtcggacctggccgccaaggccgccaagccgaccggcgagttcccgatcttc
ctcgactaccaggacgacgtcctggaggccctcaccaaggccgtcaaggacgagctcgcc
caggcgctgaccatcgccggcaagcaggagcgcgagaccgagctggaccgcgtcaagggt
ctggccgccgagaagctgctgccggagttcgagggccgcgagaaggagatctccgccgcg
taccgctcgctgaccaagaccctggtccgtgagcgcgtcatcaaggagaagaagcgcatc
gacggccgcggcgtcacggacatccgtacgctcgccgccgaggtcgaggcgatcccgcgg
gtgcacggctccgccctgttcgagcgtggcgagacccagatcctgggcgtcaccaccctc
aacatgctccgcatggagcagcagctggacaccctctccccggtgacccgcaagcgctac
atgcacaactacaacttcccgccgtactccaccggcgagaccggccgcgtcggctccccg
aagcgccgcgagatcggccacggcgcgctcgccgagcgcgcgctgatgccggtcctgccg
acccgcgaggagttcccctacgcgatccgccaggtgtccgaggccctcggctccaacggc
tcgacgtccatgggctcggtctgcgcctccaccatgtcgctgctgaacgccggtgtgccg
ctcaaggccccggtcgccggtatcgccatgggcctgatctcccaggagatcgacggcgag
acccactacgtcaccctcaccgacatcctcggtgcggaggacgccttcggcgacatggac
ttcaaggtcgccggcaccaagcagttcgtcaccgccctccagctcgacaccaagctggac
ggcatcccggcgtccgtcctggccgcggccctcaagcaggcccgcgacgcccgtctgcac
atcctcgacgtgatgatggaggcgatcgacaccccggacgagatgtccccgaacgccccg
cggatcatcaccgtcaagatccccgtggacaagatcggcgaggtcatcggccccaagggc
aagatgatcaaccagatccaggaggacaccggcgccgagatcacgatcgaggacgacggc
accatctacatcggtgccgccgacggcccggccgccgaggccgcccgcgccacgatcaac
ggcatcgccaacccgaccatgccggaggtcggcgagcgctacctgggcacggtcgtcaag
accaccaccttcggtgcgttcgtctccctgctcccgggcaaggacggcctgctgcacatc
tcgcagatccgcaagctcgccggtggcaagcgcgtggagaacgtcgaggacgtgctcggc
gtcggcgccaaggtccaggtcgagatcgccgagatcgaccagcgcggcaagctctccctc
atccccgtgatcgaggaagaggacgccgccaaggaagacaagaaggacgacgccgacaag
tga
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