Streptomyces endophytica: OJ254_00885
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Entry
OJ254_00885 CDS
T09208
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
seng
Streptomyces endophytica
Brite
KEGG Orthology (KO) [BR:
seng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
seng03016
]
OJ254_00885 (truB)
Enzymes [BR:
seng01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
OJ254_00885 (truB)
Transfer RNA biogenesis [BR:
seng03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
OJ254_00885 (truB)
Prokaryotic type
OJ254_00885 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C
TruB_C_2
PseudoU_synth_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
UZJ29312
UniProt:
A0ABY6P6P9
LinkDB
All DBs
Position
complement(213040..213969)
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AA seq
309 aa
AA seq
DB search
MKRESNKPGGLVIVDKPAGFTSHDVVAKMRGMARTRRVGHAGTLDPMATGVLVLGLERAT
KLLGHLALTEKEYVGTVRLGQTTITDDAEGEITASKAAHGLAREDIDARVAQLSGAIMQV
PSKVSAIKINGKRSYSRVREGEDVQIPARPVTVSSFVVHSAHETEAEDGTPVTDLLVSVE
CSSGTYIRALARDLGAGLGVGGHLTALRRTRVGPYKLDQAHTLEQLQAAVDAPEGGGLPI
MPVGEAADAAFTRWDVTEAQARLLLNGARIAMPRFEADGPVAAFGPDGRFLALVENQGGK
AKSLAVFAI
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgtgagagcaacaagccgggcggcctggtcatcgtcgacaagccggccggcttc
acttcgcacgacgtggtggcgaagatgcgcggtatggcccgcacccgccgggtcggccat
gccggcaccctcgacccgatggccaccggcgtgctcgtcctgggcctggagcgggccacc
aagctcctcggccacctggcgctgacggagaaggagtacgtcggtaccgtccggctgggc
cagaccacgatcaccgatgacgccgagggcgagatcaccgcgtccaaggcggcgcacggc
ctggcccgcgaggacatcgacgcccgggtcgcgcagctgtccggcgcgatcatgcaggtg
ccgtccaaggtcagcgccatcaagatcaacggcaagcggtcgtactcccgggtgcgcgag
ggcgaggacgtgcagatcccggcccgcccggtcaccgtctcctcgttcgtggtgcactcc
gcgcacgagaccgaggcggaggacggcacgccggtgaccgacctgctggtctccgtcgag
tgctcctccgggacgtacatccgtgccctggcccgcgacctgggcgccgggctcggcgtc
ggcggccatctgaccgcactgcgccgcacccgcgtcgggccgtacaagctggaccaggcg
cacaccctggagcagctccaggcggcggtggacgcccccgagggcggcgggctgccgatc
atgccggtcggtgaggcggcggacgcggccttcacccgctgggacgtcaccgaggcacag
gcccggctgctgctcaatggcgcacggatcgcgatgccgcgcttcgaggccgacgggccg
gtcgcggccttcgggcccgatgggcggttcctggcgctggtggagaaccagggcgggaag
gccaagagcctggcggtcttcgccatctga
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