Streptomyces endophytica: OJ254_01180
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Entry
OJ254_01180 CDS
T09208
Symbol
whiG
Name
(GenBank) RNA polymerase sigma factor WhiG
KO
K02405
RNA polymerase sigma factor FliA
Organism
seng
Streptomyces endophytica
Pathway
seng02020
Two-component system
seng02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
seng00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
OJ254_01180 (whiG)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
OJ254_01180 (whiG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
seng03021
]
OJ254_01180 (whiG)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
seng02035
]
OJ254_01180 (whiG)
Transcription machinery [BR:
seng03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
OJ254_01180 (whiG)
Bacterial motility proteins [BR:
seng02035
]
Flagellar system
Flagellar assembly proteins
Stator
OJ254_01180 (whiG)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
Sigma70_ECF
UPF0122
HTH_23
HTH_31
Motif
Other DBs
NCBI-ProteinID:
UZJ29356
UniProt:
A0ABY6P6E8
LinkDB
All DBs
Position
complement(281251..282087)
Genome browser
AA seq
278 aa
AA seq
DB search
MPQHTSGSDRAAVPPAARGSVRPAPPTSLDELWRSYKTSGDARLREQLILHYSPLVKYVA
GRVSVGLPPNVEQADFVSSGVFGLIDAIEKFDPERSIKFETYAITRIRGAMIDELRALDW
IPRSVRQKARAVERAYATLEAQLRRTPTEAEVAEEMGIALEELHGVFSQLSLANVVALEE
LLHVGGEGGERLSLMDTLEDTAAENPVEIAEDRELRRLLARAINTLPEREKTVVTLYYYE
GLTLAEIGNVLGVTESRVSQIHTKSVLQLRAKLADVGR
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgccccagcacacctccgggtctgaccgtgcggcagtaccacctgccgcacgcggcagc
gtgcgccccgccccgcccacctcactcgacgagctgtggcgctcctacaagacatccggc
gacgcacggttgcgggaacagctgatcctgcactactcaccgctcgtcaagtacgtcgcc
ggccgcgtcagcgtcggcctgccacccaacgtcgaacaggccgacttcgtctcctccgga
gtgttcggactgatcgacgccatcgagaagttcgaccccgaacgctccatcaagttcgag
acctacgccatcacgcgcatccggggcgccatgatcgacgaattgcgcgccctggactgg
atcccccgctccgtacgccagaaggcccgcgccgtcgagcgcgcctacgccactctcgaa
gcgcaactgcgccgtaccccgaccgaggccgaggtcgccgaggagatgggtatcgccctg
gaggagctgcacggcgtgttcagccagctgtccctggcgaacgtggtggccctcgaagag
ctgctgcacgtcggtggcgagggcggcgaacggctcagcctgatggacaccctcgaggac
accgccgccgagaaccccgtcgagatcgccgaggaccgcgaactccggcgactgctcgcc
cgcgccatcaacaccttgcccgaacgcgagaagaccgtggtcaccctctactactacgag
ggcctcaccctcgccgagatcggcaacgtcctcggggtcacggagagcagggtcagccag
atccacaccaagtccgtactgcagctcagagccaagctcgccgacgtcggccgctga
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