Streptomyces endophytica: OJ254_01520
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Entry
OJ254_01520 CDS
T09208
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
seng
Streptomyces endophytica
Brite
KEGG Orthology (KO) [BR:
seng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
seng03032
]
OJ254_01520
03036 Chromosome and associated proteins [BR:
seng03036
]
OJ254_01520
03400 DNA repair and recombination proteins [BR:
seng03400
]
OJ254_01520
DNA replication proteins [BR:
seng03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
OJ254_01520
Chromosome and associated proteins [BR:
seng03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
OJ254_01520
DNA repair and recombination proteins [BR:
seng03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
OJ254_01520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HC2
Motif
Other DBs
NCBI-ProteinID:
UZJ29407
LinkDB
All DBs
Position
complement(347657..348310)
Genome browser
AA seq
217 aa
AA seq
DB search
MNKAQLVEAIADKLGGRQNAADAVDAVLDAIVRAVVTGDRVSVTGFGSFEKVDRPARYAR
NPQTGERVRVKKTSVPRFRAGQGFKDLVSGSKKLPKGGEVSVKKAPKGSLTGGAAIKKAA
AKKATAKKAAAKKAAPAKKAAAKKATTAKKVTAKKTTAKKAPAKAAAKKATPAKKTTAKK
ATAKKTAPAKKATAKKAPAKKATARKTTAKKTTARKR
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaaggcgcagctcgtagaagccattgccgacaagctcggcggccgccagaacgcc
gcggacgcggtcgacgccgtactcgacgcgatcgtccgtgcagtggtcaccggtgaccgc
gtttcggtcaccggattcggctcgttcgagaaggtcgaccgtccggcccgttacgcccgc
aacccgcagacgggtgagcgggtgcgggtcaagaagacctcggtgccgcgcttccgcgcc
ggtcagggcttcaaggacctggtgagcggctcgaagaagctccccaagggcggcgaggtc
tccgtcaagaaggcccccaagggcagcctcaccggtggcgcggccatcaagaaggcggcc
gcgaagaaggccaccgccaagaaggccgccgcgaagaaggcggctccggcgaagaaggcc
gcggcgaagaaggccaccaccgcgaagaaggtcaccgccaagaagacgacggcgaagaag
gcccccgccaaggccgccgccaagaaggcgaccccggccaagaagaccaccgcgaagaag
gcgacggccaagaagaccgcgcccgcgaagaaggcgacggcgaagaaggctcccgccaag
aaggccaccgcgcgcaagaccaccgcgaagaagaccaccgcccgcaagcggtga
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