Streptomyces endophytica: OJ254_03270
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Entry
OJ254_03270 CDS
T09208
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
seng
Streptomyces endophytica
Brite
KEGG Orthology (KO) [BR:
seng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
seng03021
]
OJ254_03270
Transcription machinery [BR:
seng03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
OJ254_03270
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
PF0610-like_N
HTH_23
DUF7343
MarR_2
MarR
DUF722
Sigma70_ECF
HTH_24
NirdL-like_HTH
HTH_Crp_2
HTH_3
IF2_N
GerE
HTH_ParB
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
UZJ33874
UniProt:
A0ABY6PJ89
LinkDB
All DBs
Position
732944..733903
Genome browser
AA seq
319 aa
AA seq
DB search
MASSATIPGQQARPHPVGVDDHGGRLDAAEQAERADHMDQSEQQGQQAHRHDAPAPDDTL
QEPQHSQEPQDRNGARAMFYELRKLPDGSPERAELRNTLVRMHLPLVEHLARRFRNRGEP
LDDLTQVATIGLIKSVDRFDPERGVEFSTYATPTVVGEIKRHFRDKGWAVRVPRRLQELR
LSLTTATAELSQRHGRAPTVHELAEHLSISEEEVLEGLESANAYSTLSLDVPDTDDESPA
VADTLGAEDEALEGVEYRESLKPLLEDLPPREKKILLLRFFGNMTQSQIAQEVGISQMHV
SRLLARTLAQLRDKLLVEE
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccagtgcgaccatccccggtcagcaggcccggccgcatccggtgggcgtagac
gaccacggcggccggttggacgcggcggagcaggcagagcgggcggaccacatggaccag
agcgagcagcaggggcagcaggcgcatcggcatgatgcgccggctcccgacgacacgctg
caggaaccacagcattcccaggagccacaggaccgcaacggcgcccgggcgatgttctac
gagctgcgcaagctgcccgacggctcaccggagcgcgcggagctgcgcaacaccctcgtc
cgcatgcacctcccgctcgtcgagcacctggcccgacggttccgcaaccgcggcgagccc
ctcgacgacctgacccaggtcgccaccatcggcctgatcaagtcggtggaccggttcgac
ccggagcgcggcgtggagttctccacgtacgccacgcccacggtcgtcggcgagatcaag
cggcacttccgcgacaagggctgggcggtccgcgtcccgcgtcgcctccaggagctgcgg
ctgtccctgacgacggcgaccgccgagctctcccagcggcacggccgggcgcccacggtg
cacgagctggccgagcacctgtcgatctccgaggaagaggtcctggagggcctggagtcg
gccaacgcctacagcacgctctccctggacgtcccggacaccgacgacgagtcgccggcc
gtcgccgacaccctcggcgcggaggacgaggcgctggagggggtcgagtaccgcgagtcc
ctcaagccgctgctggaggacctcccgccgcgcgagaagaagatcctcctcctccgcttc
ttcggcaacatgacccagtcccagatcgcccaggaggtcggcatctcccagatgcacgtc
tcccgcctgctggcccgcaccctggcccaactccgcgacaagctcctcgtggaggagtga
DBGET
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