Streptomyces endophytica: OJ254_04075
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Entry
OJ254_04075 CDS
T09208
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
seng
Streptomyces endophytica
Pathway
seng03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
seng00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
OJ254_04075 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
seng03400
]
OJ254_04075 (xseA)
Enzymes [BR:
seng01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
OJ254_04075 (xseA)
DNA repair and recombination proteins [BR:
seng03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
OJ254_04075 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Peptidase_S66
HTH_32
Ubiq_cyt_C_chap
Motif
Other DBs
NCBI-ProteinID:
UZJ29775
UniProt:
A0ABY6P7J7
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All DBs
Position
917113..918348
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AA seq
411 aa
AA seq
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MAVSTSPETPIPVGEVSRLIGGWIDRLGAVWVEGQITQLSRRPGAGVVFLTLRDPSHDIS
LRVTCYRQVFDKVADVISEGARVVVHAKPEWYAPRGQLSLRAAEIRPVGVGELLARLEQL
KKSLAAEGLFAADRKRPLPFLPQLIGLVCGRASAAERDVLENARHRWPAVRFEVRNVPVQ
GVHAVPQVIAAVQELDALPEVDVIIVARGGGSVEDLLPFSDEQLVRAVSAAVTPVVSAIG
HEPDTPLLDLVADLRASTPTDAAKKVVPDVGEELARVQQLRERALRAVEGFLQREQRGLA
AALQRPCMERPQRMVEEREEQVTALVERGRRTLGHLLDRADSELSHTLARVVALSPRATL
ERGYAVLQKADGAAVRSPGEVENGEELRARVSAGEFRVRVGGVQGAVSDPE
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggctgtctccacgtcccccgaaacgccgatcccggtcggcgaggtgtcccggctcatc
ggcggctggatcgaccggctcggcgcggtctgggtcgaggggcagatcacccagctctcc
cgccgccccggcgcgggcgtggtcttcctgacgctgcgcgatccgtcccacgacatctcg
ctgcgcgtgacgtgctaccgccaggtcttcgacaaggtcgcggacgtgatcagcgagggc
gcccgggtggtggtgcacgccaaaccggagtggtacgccccgcgcggtcagctgtcgctg
cgggccgcggagatccggccggtcggggtcggcgagctgctggcgcggctggagcagttg
aagaagtcgctggcggcggaggggctgttcgcggcggaccgcaagcggccgctgccgttc
ctgccgcagctgatcgggctggtctgcgggcgggccagcgccgcggagcgggacgtgctg
gagaacgcccggcaccgctggccggccgtccgcttcgaggtgcgcaacgtaccggtgcag
ggcgtgcatgcggtgccgcaggtgatcgcggcggtgcaggagctggacgcgctgcccgag
gtggacgtgatcatcgtggcccgcggcggcggcagcgtggaggatctgctgccgttctcc
gacgagcagttggtccgggcggtgagcgcggcggtgacaccggtcgtctcggcgatcggg
cacgagccggacaccccgctgctggatctggtggccgatctgcgcgcctcgacgccgacg
gacgcggcgaagaaggtggtgccggacgtgggtgaggagctggcccgggtgcagcagctg
cgcgagcgggcgctgcgcgcggtcgagggcttcctgcagcgggagcagcgggggctggcg
gcggcgctgcagcggccgtgcatggagcgtccgcagcggatggtggaggagcgcgaggag
caggtcacggccctggtggagcgcggccggcggacgctggggcatctgctggaccgggcc
gactccgagctgtcgcacaccctcgcgcgggtggtcgcgctctcccccagggcgacgctg
gagcgcggctatgcggtgctgcagaaggcggacggggcggcggtgcgctcccccggggag
gtcgagaacggcgaggagctgcgggcccgggtgtccgcgggcgagttccgggtccgggtc
ggcggcgtccagggcgctgtcagtgaccccgaatag
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