Streptomyces endophytica: OJ254_10550
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Entry
OJ254_10550 CDS
T09208
Symbol
hemB
Name
(GenBank) porphobilinogen synthase
KO
K01698
porphobilinogen synthase [EC:
4.2.1.24
]
Organism
seng
Streptomyces endophytica
Pathway
seng00860
Porphyrin metabolism
seng01100
Metabolic pathways
seng01110
Biosynthesis of secondary metabolites
seng01120
Microbial metabolism in diverse environments
seng01240
Biosynthesis of cofactors
Module
seng_M00846
Siroheme biosynthesis, glutamyl-tRNA => siroheme
seng_M00926
Heme biosynthesis, bacteria, glutamyl-tRNA => coproporphyrin III => heme
Brite
KEGG Orthology (KO) [BR:
seng00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
OJ254_10550 (hemB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
seng04147
]
OJ254_10550 (hemB)
Enzymes [BR:
seng01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.24 porphobilinogen synthase
OJ254_10550 (hemB)
Exosome [BR:
seng04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
OJ254_10550 (hemB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ALAD
DUF5707
Motif
Other DBs
NCBI-ProteinID:
UZJ30708
UniProt:
A0ABY6PAS3
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All DBs
Position
2343115..2344104
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AA seq
329 aa
AA seq
DB search
MTKYGSFPGARPRRLRTTPAMRRMVAEYRLHPADLILPAFVREGIAEPAPISAMPGVVQH
TRDTLRKAAVEAVEAGVAGIMLFGVPLDEKKDAVGTAGTDPDGILQVAIRDVRAEVGDDL
VIMSDLCLDEYTDHGHCGVLDAAGRVDNDATLERYAEMAQVQADAGVHVVGPSGMMDGQV
GVVRDALDQTGHEDVSILAYTAKYSSAFYGPFREAVGSSLKGDRKTYQQDPANLRESLRE
LALDLDEGADMVMVKPALPYLDVLAKIADAVDVPVAAYQISGEYAMIEAAAEKGWIDRDK
AIMEALTGIKRAGANMILTYWATEVAQGL
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagtacggaagcttccccggtgcgcggccgcggcggctgcgcaccaccccggcg
atgcgccggatggtcgccgagtaccggctgcacccggccgacttgatcctcccggcgttc
gtccgggagggcatcgccgagccggcgccgatctccgcgatgcccggggtcgtccagcac
acccgggacaccctccgcaaggccgccgtcgaggcggtggaggcgggcgtcgccgggatc
atgctgttcggcgtgccgctggacgagaagaaggacgccgtgggcaccgccggcaccgac
ccggacggcatcctgcaggtcgccatcagggatgtccgggccgaggtcggcgacgacctg
gtgatcatgtcggacctgtgcctggacgagtacaccgaccacggccactgcggtgtcctg
gacgccgccgggcgggtcgacaacgacgcgacgctggagcgctacgcggagatggcgcag
gtccaggccgacgcgggcgtccacgtcgtgggccccagcggcatgatggacggccaggtc
ggcgtggtccgggacgccctggaccagaccggccacgaggacgtgtcgatcctcgcctac
acggcgaagtactcctcggcgttctacggcccgttccgcgaggcggtgggctcgtcgctg
aagggcgaccgcaagacgtaccagcaggaccccgccaacctccgcgagtcgctgcgcgag
ctggcgctcgacctggacgagggcgccgacatggtcatggtcaagccggcgctgccctac
ctggacgtactggcgaagatcgccgacgcggtggacgtgccggtggccgcgtaccagatc
tccggcgagtacgcgatgatcgaggcggccgccgagaagggctggatcgaccgcgacaag
gcgatcatggaggccctgacgggcatcaagcgggccggcgcgaacatgatcctcacgtac
tgggcgacggaggtcgcgcaggggctgtga
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