Streptomyces endophytica: OJ254_14570
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Entry
OJ254_14570 CDS
T09208
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
seng
Streptomyces endophytica
Pathway
seng03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
seng00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
OJ254_14570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
seng03400
]
OJ254_14570
Enzymes [BR:
seng01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
OJ254_14570
DNA repair and recombination proteins [BR:
seng03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
OJ254_14570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
Viral_helicase1
HHH_5
AAA_11
AAA_22
Helicase_RecD
NPHP3_N
PIF1
TraI_hel_assoc_N
AAA_16
nSTAND3
SLFN-g3_helicase
AAA
PhoH
HTH_IclR
UvrD_C
AAA_5
UvrD-helicase
DEAD
TrwB_AAD_bind
DAP3
Motif
Other DBs
NCBI-ProteinID:
UZJ31317
LinkDB
All DBs
Position
3244383..3246593
Genome browser
AA seq
736 aa
AA seq
DB search
MVNAAVVEGVLERITYANEENGYTVARVDTGRGAGDLLTVVGALLGAQPGESLRMEGRWG
SHPQYGKQFLCDNYTTVLPATIQGIRRYLGSGLIKGIGPRIADRIVEHFGTDTLDVIETD
PGRLVEVPGLGPKRTKMIGAAWEEQKAIKEVMVFLQGVGVSTSIAVRIYKKYGDASISVV
RNQPYKLAADVWGIGFLTADRIAQAVGIPHDSPDRVKAGLQYALSQSTDQGHCFLPEEQL
IADAVKLLQVDTGLVIDCLGELAAEPEGVVREKVPAGEDGAEVTAVYLVPFHRAEISLAG
RLTRLLRTDEDRMPVFRDVDWDKALAWLARRTGADLAPEQQEAVRLALTRKVAVLTGGPG
CGKSFTVRSVVELARAKKATVVLAAPTGRAAKRLSELTGAEASTVHRLLELKPGGDAAYD
ADRPLDADLVVVDEASMLDLLLANKLVKAVPPGAHLLLVGDVDQLPSVGAGEVLRDLLAP
SGPVPAVRLTRIFRQAQQSGVVTNAHRINSGVPPLTTGLTDFFLFAEEDNEEAGRLAVDV
AARRIPAKFGLDPRRDVQVLTPMHRGPAGAGALNGLLQQAITPARPDLPERRFGGRVFRV
GDKVTQVRNNYEKGSNGVFNGTVGVVTALDEVEQRLTVRTDEDEEVPYDFDELDELAHAY
AVTIHRSQGSEYPAVVIPVTTSAWMMLQRNLLYTAVTRAKRLVVLVGSRKALGQAVRTVS
AGRRGTALAHRLAGAM
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atggtcaacgcagccgtggtggaaggggtcctggagcggatcacgtacgccaacgaggag
aacggctacaccgtcgcgcgggtcgacaccggccggggcgcgggcgatctgctgaccgtc
gtgggcgcgctgctgggggcgcagccgggtgagtcgctgcgcatggagggccgttggggc
tcgcacccccagtacggcaaacagttcctgtgcgacaactacaccacggtcctgccggcc
accatccagggcatccgccgctatctgggctccggtctgatcaagggcatcggcccgcgc
atcgccgaccgcatcgtcgagcacttcggcaccgacaccctcgacgtcatcgagaccgac
cccgggcgcctcgtcgaggtgccgggcctgggccccaagcggaccaagatgatcggcgcg
gcctgggaggagcagaaggccatcaaggaggtcatggtcttcctccagggcgtcggggtc
tccacgtccatcgccgtgcggatctacaagaagtacggcgacgcctcgatctccgtcgtc
cgcaaccagccctacaagctcgccgccgacgtctggggcatcggcttcctgaccgccgac
cgcatcgcccaggccgtcgggatcccgcacgacagcccggaccgggtcaaggcgggcctg
cagtacgccctgtcgcagtccacggaccaggggcactgcttcctgcccgaggagcaactg
atcgccgacgcggtcaagttgctccaggtggacaccggcctggtgatcgactgcctgggc
gagctggccgcggagccggagggcgtggtgcgcgagaaggtgcccgccggggaggacggc
gcggaggtcaccgccgtctatctggtgccgttccaccgcgcggagatctcgctcgccggg
cggctgacccggctgctgcgcaccgacgaggaccggatgccggtgttccgggacgtcgac
tgggacaaggcgctggcctggctggcccgccgtacgggcgccgatctggcgcccgagcag
caggaggcggtgcggctggcgctgacgcggaaggtcgcggtgctcaccggcggcccgggc
tgtggcaagtccttcacggtccgttccgtcgtcgagctggcccgcgccaagaaggccacg
gtcgtgctggccgcgcccacgggccgggccgccaagcggctgtcggagctgaccggcgcg
gaggcctccacggtccaccgcctccttgagctcaagcccggcggggacgccgcctacgac
gcggaccggccgctggacgccgatctggtggtcgtcgacgaggcgtccatgctggacctg
ctgctggccaacaagctggtcaaggcggtcccgccgggcgcccatctgctgctggtgggc
gacgtcgaccagttgccgtccgtcggggccggcgaggtgctgcgggacctgctggccccc
tccggcccggtgccggccgtccggctgacccggatcttccggcaggcccagcagtccggc
gtggtcaccaacgcccaccgcatcaattccggcgtcccgccgctgaccaccgggctgacc
gatttcttcctcttcgcggaggaggacaatgaggaggccgggcggctcgccgtggacgtc
gcggcccgccgcatcccggcgaagttcggtctcgacccgcgccgggacgtccaggtgctg
accccgatgcaccgcggcccggccggagcgggcgcgctgaacggtctgctccagcaggcc
atcacccccgcccgccccgacctgcccgagcggcgtttcggcggccgggtcttccgggtg
ggcgacaaggtcacccaggtcaggaacaactacgaaaagggcagtaacggcgtcttcaac
ggcacggtgggcgtggtcaccgccctggacgaggtcgagcagcggctgacggtccgcacg
gacgaggacgaggaggtcccgtacgacttcgacgaactcgacgaactcgcgcacgcctat
gccgtgacgatccatcgctcgcagggtagtgagtatccagcggtggtgattccggtcacc
accagcgcctggatgatgctgcagcgcaatttgctgtataccgccgtcacccgggcaaag
cgtttggtggtgctggtcggctcccggaaggccctggggcaggccgtacgcacggtttcc
gccggtcggcggggtacggcgctggctcaccggctcgccggggcgatgtga
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