Streptomyces endophytica: OJ254_15260
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Entry
OJ254_15260 CDS
T09208
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
seng
Streptomyces endophytica
Pathway
seng03030
DNA replication
seng03430
Mismatch repair
seng03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
seng00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OJ254_15260 (holA)
03430 Mismatch repair
OJ254_15260 (holA)
03440 Homologous recombination
OJ254_15260 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
seng03032
]
OJ254_15260 (holA)
03400 DNA repair and recombination proteins [BR:
seng03400
]
OJ254_15260 (holA)
Enzymes [BR:
seng01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OJ254_15260 (holA)
DNA replication proteins [BR:
seng03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
OJ254_15260 (holA)
DNA repair and recombination proteins [BR:
seng03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
OJ254_15260 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DNA_pol3_gamma3
Motif
Other DBs
NCBI-ProteinID:
UZJ31417
LinkDB
All DBs
Position
3425103..3426086
Genome browser
AA seq
327 aa
AA seq
DB search
MARKTANDDPLAPVTIAVGQEDLLLERAMQQVVAAARAADADTDVRDLTPEQLQPGTLAE
LTSPSLFAERKVVVVRSAQDLSADTIKDVKAYLGSPAEEITLVLLHAGGAKGKGLLDAAR
KAGAREVACPKMTKPADRLAFVRGEFRTVGRSATPEACQSLVDAIGSDLRELASACAQLA
ADIEGTIDEAVVGRYYTGRAEASSFTVADRAVEGRAAEALEALRWAIATGVAPVMITSAL
AQGVRAIGKLASAPRGARPGDLARDLGMPPWKIDRVRQQMRGWSADGVATALRAVAEADA
GVKGGGDDPEYALEKAVVTIARAARSR
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggccaggaagacagcgaacgacgatcccctcgcccccgtgacgatcgcggtggggcag
gaagacctgctgctggagcgtgcgatgcagcaggtggtggcggctgcccgcgcggccgat
gcggacacggatgtgcgcgacctcacccccgagcagctccagcccggcaccctcgccgag
ctgaccagcccctcgctgttcgccgagcgcaaggtcgtggtggtgcgctcggcccaggac
ctgtccgcggacacgatcaaggacgtcaaggcgtatctcggctcgcccgccgaggagatc
acgctcgtgctgctgcatgccggcggcgccaagggcaagggcctgctggacgccgcccgt
aaggccggggcgcgggaagtggcctgtccgaagatgaccaagccggccgaccggctggcg
ttcgtccggggggagttccgtacggtcgggcggtcggcgacgcccgaggcgtgccagtcg
ctggtcgatgcgatcggcagcgatctgcgagagctggcctcggcgtgtgcgcagctggcc
gccgacatcgagggcacgatcgacgaggcggtcgtcgggcggtactacacgggccgggcc
gaggcgtcgagcttcaccgtcgcggaccgtgccgtcgagggccgggccgccgaagccctg
gaggcgctgcgctgggcgatcgcgaccggggtcgcgcccgtcatgatcaccagcgcgctc
gcccagggcgtccgggccatcggcaaactcgcctccgcgccgcgcggcgcccgccccggc
gatctcgcccgcgacctcggcatgccgccctggaagatcgaccgggtgcggcagcagatg
cgcggctggtcggcggacggtgtggcgacggcgctgcgcgcggtggcggaggccgatgcg
ggcgtcaagggcggcggggacgatcccgagtacgccctggagaaggcggtcgtgacgatc
gcccgggcggcgcggtcccgctga
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