Streptomyces endophytica: OJ254_15855
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Entry
OJ254_15855 CDS
T09208
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
seng
Streptomyces endophytica
Pathway
seng02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
seng00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
OJ254_15855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
seng03021
]
OJ254_15855
Transcription machinery [BR:
seng03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
OJ254_15855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_28
KORA
NESP55
Motif
Other DBs
NCBI-ProteinID:
UZJ31509
UniProt:
A0ABY6PCD7
LinkDB
All DBs
Position
3556157..3557563
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AA seq
468 aa
AA seq
DB search
MTYGTDGGSAATVPGLSAATAAITLEVAPVQTQTLADAPAAAPQLPPPVAPPAAEPVAGP
LLDPSDEPLTVPQQAEPPAAEMLLTLAPDVLGPGTAPDPEHGPALPAGPAADVDAEADAE
TDAEAETEADPEAQAEAAPEPGPAPEPGREPASEPGPAPRADTSSGPSSDLFRQYLREIG
RIPLLTAAEEVELARRVEAGLFAEEKLTNTPDLSSQLAYDLDQLVVLGRMAKRRLIEANL
RLVVSVAKRYVGRGLTMLDLVQEGNLGLIRAVEKFDYARGYKFSTYATWWIRQAMSRALA
DQARTIRVPVHVVELINRVVRVQRRMLQERGYEPTPEEVAAHLDLTGERVSEVLRLAQEP
VSLHAPVGEEEDVALGDLIEDGDAASPVESAAFLLLREHLDAVLSTLGERERKVVQLRYG
LADGRPRTLEEIGRIFGVTRERIRQIESKTLNKLRDHAFADQLRGYLD
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
ttgacgtacgggacggacggcggctcggccgcaaccgtacccggcctttctgccgccaca
gcagcgatcaccctggaggtcgcccccgtgcagacccagaccctcgccgacgcgccggcc
gccgccccgcagctcccgccgcccgtcgcgccaccagccgcggagccggtcgccgggccg
ctgctcgatccgtccgacgagcccctcacggtcccgcagcaggccgaacccccggccgcc
gaaatgctcctgaccctcgccccggacgtcctcggccccggcaccgcccccgacccggag
cacggaccggccctccccgccggcccggcagcagacgtagacgcagaagcagacgcagaa
acagacgcagaggcggaaacggaagccgacccggaagcgcaagcggaagccgcaccggaa
cccgggccggcgccagagccagggcgagagcccgcatccgagcccggccccgcgccccgt
gccgacaccagcagcggcccctcctccgacctcttccgccagtacctccgcgagatcggc
cggatcccgctgctcaccgccgccgaggaggtcgaactcgcccgccgcgtcgaggccggt
ctgttcgccgaggagaagctcaccaacacccccgacctgtcctcccaactcgcctacgac
ctcgaccagttggtggtcctcggccggatggccaagcgccggctcatcgaggccaacctc
cgcctggtggtctccgtcgccaagcgctacgtcggccgcggcctgaccatgctcgacctc
gtccaggagggcaacctcgggctgatccgcgccgtcgagaagttcgactacgcccgcggc
tacaagttctccacctacgccacctggtggatccgccaggcgatgtcccgcgccctggcc
gaccaggccagaaccatccgcgtcccggtccacgtcgtcgagctgatcaaccgcgtggtg
cgggtccagcgccggatgctccaggaacgcggctacgaaccgacgcccgaggaggtcgcc
gcccacctcgacctgaccggggaacgggtcagcgaggtgctccggctggcccaggaaccg
gtctcgctgcacgccccggtcggcgaggaggaggacgtcgcgctcggcgacctcatcgag
gacggcgacgccgcctcacccgtcgaatccgccgcgttcctgctgctccgcgagcacctc
gacgcggtgctgtccacgctcggcgaacgcgaacgcaaggtcgtccagctccgctacggc
ctggccgacggccgcccccgcacgctggaggagatcggccggatcttcggcgtgacccgc
gaacggatacggcagatcgagtccaagaccctcaacaaactccgcgaccacgccttcgcc
gaccagctccgcggctacctggactga
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