Streptomyces endophytica: OJ254_18150
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Entry
OJ254_18150 CDS
T09208
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
seng
Streptomyces endophytica
Pathway
seng03030
DNA replication
seng03410
Base excision repair
seng03420
Nucleotide excision repair
seng03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
seng00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
OJ254_18150 (polA)
03410 Base excision repair
OJ254_18150 (polA)
03420 Nucleotide excision repair
OJ254_18150 (polA)
03440 Homologous recombination
OJ254_18150 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
seng03032
]
OJ254_18150 (polA)
03400 DNA repair and recombination proteins [BR:
seng03400
]
OJ254_18150 (polA)
Enzymes [BR:
seng01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
OJ254_18150 (polA)
DNA replication proteins [BR:
seng03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
OJ254_18150 (polA)
DNA repair and recombination proteins [BR:
seng03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
OJ254_18150 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OJ254_18150 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
DNA_pol_lambd_f
HHH_5
HHH_2
Motif
Other DBs
NCBI-ProteinID:
UZJ31853
LinkDB
All DBs
Position
4077230..4079968
Genome browser
AA seq
912 aa
AA seq
DB search
MAAKAAKKSEATGTEAAAGDRPRLLLMDGHSMAYRAYFALPVENFTTVTGQPTNAIYGFA
SMLANTLRDEAPTHFAVAFDVSRKTWRSEEYPEYKANRSKTPDEFKGQVELIGEMLDAMR
VKRFAVDGFEADDVIATLTEQAVAQGFHVSIVTGDRDSFQLVSDDVTVLYPTKGVSELTR
FTPEKVFEKYGLTPAQYPDFAALRGDPSDNLPGIPGVGEKTATKWINQFGSFAELVERVD
EVKGKAGQNLRDHLESVKRNRVLTEMVRDVKLPCGPEELTREAYDREALKVFLNALEIRN
QGLRDRLHAVDPGAVETAEEAAPAPGVEVDGTVLATGELAPWLAEHATGPLGVATVDVWT
LGSGSVAEIALATPEGPAAWFDPAQLDEADEQAFAAWSADPERPKVMHNAKGLMRVFGEH
GWRIEGVTMDTALAAYLVKPGRRSFALDALSIEYLGRDLAPAAAGDGQLAFGADEQAEAD
ALMAQARTVLDLGTAFGTKLAEVGAADLLRNVELPTSDLLARMERAGIAADRGWLERMEQ
QFAGAVAQAVKEAHAAAGHEFNLGSPKQLQEVLFGELGLPKTKKTKTGYTTDADALAWLA
AQTDNELPVIMLRHREQAKLRTTVEGLIKTIGADGRIHTTFNQTVAATGRLSSTDPNLQN
IPVRTDEGRAIRRGFVVGEGFESLLTADYSQIELRVMAHLSEDEGLIEAFTSGEDLHTTV
ASQVFSVAKTEVDPEMRRKIKAMSYGLAYGLSAFGLSQQLGIQPDEARKLMDTYFERFGG
VRDYLRRVVDEARATGYTETMLGRRRYLPDLNSDNRQRREMAERMALNAPIQGTAADIVK
IAMLRVDIALRAAELRSRMLLQVHDEIVVEVAPGERQQVEELLRREMADAVELRAPLDVS
VGSGKDWESAAH
NT seq
2739 nt
NT seq
+upstream
nt +downstream
nt
gtggcagcaaaggcagcgaagaagagcgaagcgaccggcaccgaggcggcggcgggcgat
cgtccccgcctgctcctcatggacggacattccatggcataccgggcgtatttcgccctg
cccgtggagaatttcaccaccgtcaccggccaaccgaccaatgcgatctacggcttcgcg
tcgatgctcgcgaacaccctgcgtgacgaggcgcccacgcatttcgcggtcgccttcgac
gtctcgcgcaagacctggcgctccgaggagtatccggagtacaaggccaaccgttccaag
acccccgacgagttcaagggccaggtcgagctgatcggcgagatgctcgacgcgatgcgg
gtcaagcgcttcgcggtggacggcttcgaggccgacgacgtcatcgcgacgctcaccgag
caggccgtcgcccagggcttccacgtctcgatcgtcaccggcgaccgggactccttccag
ctggtctccgacgacgtcacggtcctctaccccaccaagggcgtctcggagctgacccgg
ttcacccccgagaaggtcttcgagaagtacggcctgacccccgcccagtacccggacttc
gccgcgctgcgcggcgacccgtccgacaacctccccggcatccccggcgtcggcgagaag
accgccacgaagtggatcaaccagttcggttcgttcgcggaactggtggagcgcgtggac
gaggtcaagggcaaggccggccagaacctccgtgatcacctggagtcggtgaagcgcaac
cgcgtgctgaccgagatggtgcgcgatgtgaagctgccgtgcggccccgaggagctgacc
cgcgaggcgtacgaccgcgaggccctcaaggtgttcctcaacgccctggagatccgcaac
cagggtctgcgcgaccggctgcacgccgtcgacccgggcgccgtggagaccgccgaggag
gccgcgccggcccccggcgtcgaggtggacggcacggtcctggccaccggcgaactcgcc
ccgtggctggccgaacacgccaccggcccgctgggcgtggccaccgtcgacgtctggaca
ctgggcagcggcagcgtggcggagatcgcgctggccaccccggaggggccggccgcctgg
ttcgaccccgcgcagctggacgaggccgacgagcaggcgttcgccgcctggagcgccgac
cccgagcgcccgaaggtgatgcacaacgccaagggcctgatgcgggtcttcggcgagcac
ggctggcgcatcgagggcgtgacgatggacaccgccctcgccgcctatctggtcaagccc
ggccgccgctccttcgcgctggacgccctctccatcgagtacctcggccgggacctcgcc
ccggccgcggccggcgacggccagctggcgttcggcgcggacgaacaggccgaggcggac
gccctgatggcgcaggcccgtacggtcctcgacctgggcacggcgttcgggacgaagctc
gccgaggtcggggcggccgatctgctgcgcaatgtggagctgccgaccagcgatctgctg
gcccggatggagcgggccggtatcgccgcggaccggggctggctggagcggatggagcag
cagttcgccggggcggtcgcgcaggccgtcaaggaggcgcacgccgccgcgggccatgag
ttcaacctcggctcgcccaagcagctccaggaggtcctcttcggcgagctgggcctgccg
aagaccaagaagaccaagaccggctacaccaccgacgccgacgccctggcctggctggcc
gcgcagaccgacaacgaactcccggtgatcatgctccgccaccgtgagcaggccaagctg
cgcacgaccgtcgagggcctgatcaagaccatcggcgcggacggccggatccacaccacc
ttcaaccagaccgtcgccgccaccggccggctgtcgtccaccgaccccaacctgcagaac
atcccggtgcggacggacgagggccgggcgatccgccgcggcttcgtcgtcggcgagggc
ttcgagtcgctgctgaccgccgactacagccagatcgaactgcgcgtgatggcccacctc
tccgaggacgagggcctgatcgaggcgttcacctccggcgaggacctgcacaccaccgtc
gcctcccaggtcttctcggtcgccaagaccgaggtcgacccggagatgcgccgcaagatc
aaggcgatgtcctacggcctggcgtacgggctgtcggcgttcggcctctcccagcagctg
ggcatccagcccgacgaggcccgcaagctgatggacacctacttcgagcggttcggcggg
gtgcgcgactacctccgccgcgtcgtggacgaggcccgcgccaccggctacacggagacg
atgctcggccgccgccgctatctgccggacctcaacagcgacaaccgccagcgccgcgag
atggccgagcggatggcgctgaacgccccgatccagggcaccgccgccgacatcgtcaag
atcgcgatgctgcgggtcgacatcgccctgcgggccgcggagctgcggtcccggatgctg
ctccaggtccatgacgaaatcgtcgtcgaggtggcccccggcgaacgccagcaggtcgag
gagctgctccgccgcgagatggccgacgcggtcgaactgcgcgccccgctggacgtgtcg
gtcggctccggcaaggactgggagtcggcggcacactga
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