Streptomyces endophytica: OJ254_18340
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Entry
OJ254_18340 CDS
T09208
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
seng
Streptomyces endophytica
Pathway
seng03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
seng00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
OJ254_18340 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
seng03400
]
OJ254_18340 (uvrA)
DNA repair and recombination proteins [BR:
seng03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
OJ254_18340 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
OJ254_18340 (uvrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_21
RsgA_GTPase
AAA_16
nSTAND1
AAA_33
HC2
AAA_25
AAA_22
DnaJ_CXXCXGXG
Viral_helicase1
cobW
BCA_ABC_TP_C
Motif
Other DBs
NCBI-ProteinID:
UZJ31879
UniProt:
A0ABY6PDH0
LinkDB
All DBs
Position
4123964..4127008
Genome browser
AA seq
1014 aa
AA seq
DB search
MADRLIVRGAREHNLRNVSLDLPRDSLIVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSS
YARQFLGQMDKPDVDFIEGLSPAVSIDQKSTSRNPRSTVGTITEVYDYLRLLFARIGKPH
CPECGRPIARQSPQAIVDKVLELPEGSRFQVLSPLVRERKGEFVDLFADLQTKGYSRARV
DGETIQLAEPPKLKKQEKHTIEVVVDRLTVKESAKRRLTDSVETALGLSGGMVILDFVDL
DPEDPQRERMYSEHLYCAYDDLSFEELEPRSFSFNSPFGACPECTGIGTRMEVDPDLIVP
DEDRSLDEGALHPWSGGHTKEYFGRLVGALADALGFRTDIPWAGLPARAKKALLYGHKTQ
IEVRYRNRYGRQRAYTTPFEGAVPFVKRRHSEAESDSSRERFEGYMREVPCPTCEGTRLK
PIVLAVTVQEKSIAEVAAMSISDCADFLRGMTLNAREKKIAERVLKEVNERLKFLVDVGL
DYLSLNRAAGTLSGGEAQRIRLATQIGSGLVGVLYVLDEPSIGLHQRDNHRLIETLVRLR
DMGNTLIVVEHDEDTIKVADWVVDIGPGAGEHGGRVVHSGPMKQLLTNKESITGQYLSGK
KAIATPDIRRPADPARRLTVHGAKENNLRDIDVSFPLGVFTAVTGVSGSGKSTLVNDILY
THLARELNGAKSVPGRHTRVAGDDLVDKVVHVDQSPIGRTPRSNPATYTGVFDHVRKLFA
ETMEAKVRGYLPGRFSFNVKGGRCENCSGDGTIKIEMNFLPDVYVPCEVCHGARYNRETL
EVHYKGKSIAEVLDMPIEEALSFFEAVPTIARHLKTLHEVGLGYVRLGQSAPTLSGGEAQ
RVKLASELQKRSTGSTVYVLDEPTTGLHFDDISKLINVLSGLVDKGNTVIVIEHNLDVIK
TADWVVDMGPEGGNGGGLVIAEGTPEEIASVPASHTGKFLREILGDRVSDAVTVAAGNGG
RSSGPGAAKTPAARKPAAKKAAAKKTAATTTAKKTAAKKTAAKKTAARTRRSAS
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
gtggccgaccgtctcatcgtccgtggcgctcgcgagcacaacctccgcaacgtctcgctc
gacctcccccgcgactccctcatcgtcttcacgggcctctccggttcgggcaagtcctcg
ctcgccttcgacacgatcttcgccgaggggcagcggcgatacgtcgagtcgctgtcctcg
tacgcccggcagttcctcgggcagatggacaagcccgacgtggacttcatcgagggcctc
tcgcccgcggtgtcgatcgaccagaagtcgacctcgcgcaacccgcgctcgacggtcggc
acgatcaccgaggtctacgactacctccgcctcctcttcgcccgcatcggcaagccgcac
tgccccgagtgcggccggccgatcgcccggcagtcgccgcaggccatcgtcgacaaggtg
ctggagctgcccgagggcagccgcttccaggtgctctcccccctggtgcgcgagcgcaag
ggcgagttcgtcgacctcttcgccgacctgcagaccaagggctacagccgcgcccgggtc
gacggcgagaccatccagctcgccgagcccccgaagctcaagaagcaggagaagcacacc
atcgaggtggtcgtcgaccgcctcacggtcaaggagagcgccaagcgccggctgaccgac
tccgtcgagaccgccctcggcctctccggcggcatggtcatcctcgacttcgtcgacctc
gacccggaggacccccagcgcgagcggatgtactccgagcatctgtactgcgcctacgac
gacctctccttcgaggagctcgaaccccgctccttctccttcaactcgcccttcggtgcc
tgccccgagtgcaccggcatcgggacgcgcatggaggtcgaccccgacctgatcgtcccc
gacgaggaccgctccctcgacgagggcgccctccacccctggtccggcggacacaccaag
gagtacttcggccgcctggtcggcgcgctcgccgacgccctcggattccgtacggacatc
ccctgggccgggctgccggcccgcgccaagaaggcgctgctgtacggccacaagacccag
atcgaggtccgctaccgcaaccgctacggccgccagcgggcctacaccacccccttcgag
ggcgcggtgccgttcgtcaagcgccggcactccgaggcggagagcgacagcagccgcgag
cgcttcgagggctatatgcgcgaggtgccctgcccgacctgtgagggcacccggctgaag
ccgatcgtgctcgccgtcacggtccaggagaagtcgatcgccgaggtcgcggccatgtcg
atcagcgactgcgccgacttcctgcgggggatgacgctcaacgcccgtgagaagaagatc
gccgagcgggtgctcaaggaggtcaacgaacggctgaagttcctggtcgacgtcggcctg
gactacctctcgctgaaccgcgcggccggcaccctctccggcggtgaggcccagcgcatc
cggctcgccacccagatcggctccggcctggtcggcgtgctctacgtcctcgacgaaccc
tccatcggcctgcaccagcgcgacaaccaccggctgatcgaaaccctggtgcggctgcgc
gacatgggcaacaccctgatcgtggtggagcacgacgaggacaccatcaaggtcgcggac
tgggtcgtggacatcggccccggcgccggcgagcacggcggccgggtcgtgcacagcggc
cccatgaagcagctgctgaccaacaaggagtcgatcaccggtcagtacctgtccggcaag
aaggccatcgcgaccccggacatccgccggcccgccgaccccgcccgccggctgaccgtc
cacggcgcgaaggagaacaacctccgcgacatcgacgtctccttcccgctcggggtgttc
accgccgtcaccggcgtctccggctccggcaagtcgacgctggtcaacgacatcctttac
acccacctcgcgcgcgagctgaacggcgccaagtcggtaccgggccggcacacccgggtc
gccggtgacgacctggtcgacaaggtcgtccatgtcgaccagtccccgatcggccgcacc
ccgcgctccaacccggccacctacaccggtgtcttcgaccacgtccgcaagctcttcgcg
gagacgatggaggccaaggtccggggctatctgccgggacgcttctcgttcaacgtcaag
ggcggccgctgcgagaactgctccggcgacggcacgatcaagatcgagatgaacttcctg
ccggacgtgtacgtgccgtgcgaggtctgccacggtgcgcgctacaaccgcgagacgctg
gaggtccactacaagggcaagtccatcgccgaggtgctggacatgcccatcgaggaggcg
ctgagcttcttcgaggcggtccccaccatcgcccggcacctcaagacgctccacgaggtc
ggcctcggatacgtccgcctcgggcagtccgcgccgacgctctcgggcggtgaggcgcag
cgcgtcaagctggccagcgagctgcagaagcgctcgacgggcagcacggtctacgtcctc
gacgagccgaccaccggtctgcacttcgacgacatcagcaagctgatcaacgtgctgtcc
gggctggtcgacaagggcaacaccgtgatcgtcatcgagcacaacctcgatgtgatcaag
acggcggactgggtcgtcgacatgggccccgagggcggcaacggcggcggcctggtcatc
gccgagggcacgcccgaggagatcgcctcggtcccggccagccacaccggcaagttcctg
cgggagatcctcggcgaccgggtcagcgacgccgtgacggtcgcggccggcaacggcggc
cgctcgtccggccccggcgcggcgaagacccccgccgccaggaagccggccgccaagaag
gccgcggcgaagaagaccgcggccacgacgacggcgaagaagaccgccgccaagaagacc
gccgccaagaagaccgcggcgcgcacccgccggtccgcgtcctga
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integrated database retrieval system
