Streptomyces endophytica: OJ254_19325
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Entry
OJ254_19325 CDS
T09208
Symbol
der
Name
(GenBank) ribosome biogenesis GTPase Der
KO
K03977
GTPase
Organism
seng
Streptomyces endophytica
Brite
KEGG Orthology (KO) [BR:
seng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
seng03009
]
OJ254_19325 (der)
Ribosome biogenesis [BR:
seng03009
]
Prokaryotic type
GTPases
OJ254_19325 (der)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
KH_dom-like
FeoB_N
GTP_EFTU
Dynamin_N
AIG1
RsgA_GTPase
Roc
Ras
AAA_16
ABC_tran
NTPase_1
AAA_28
Arf
ATPase_2
AAA_22
AAA_33
ATP-synt_ab
Motif
Other DBs
NCBI-ProteinID:
UZJ32030
LinkDB
All DBs
Position
4332107..4333567
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AA seq
486 aa
AA seq
DB search
MNDQIPTGDEHGALGDAEYAEFMELAAQEGFDLEEVEGDIAAAGHGPLPVLAVIGRPNVG
KSTLVNRIIGRREAVVEDKPGVTRDRVTYEADWNGRRFKVVDTGGWEQDVLGIDASVAMQ
AEFAIEAADAVVFVVDAKVGATDTDEAVVKLLRRAGKPVVLVANKVDGPSGEADAAMLWS
LGLGEPHPVSALHGRGTGDMLDAALEALPEAPAQTFGQAVGGPRRVALIGRPNVGKSSLL
NKVAGEERVVVNELAGTTRDPVDELIQLGGKTWKFVDTAGIRRRVHLQEGADYYASLRTA
AAVEKAEVAVVLIDAGESISVQDQRIITMAVEAGRALVIAYNKWDNLDEERRFYLEREIE
RDLVQVPWAMRVNVSARTGRHMEKLVPAIETALAGWETRIPTGRLNAFLGEIVASHPHPI
RGGKQPRILFGTQAGTKPPRFVLFASGFLEAGYRRFIERRLREEFGFEGTPIHISVRVRE
KRGKKK
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaccagatccccaccggcgacgagcacggtgcgcttggcgacgccgagtacgcg
gagttcatggagctcgccgcgcaggagggcttcgacctcgaggaggtcgagggcgacatc
gccgcggccggccacggcccgctgcccgtcctcgccgtcatcggccgacccaacgtcggt
aagtcgacactggtgaaccgcatcatcggccgtcgcgaggcggtcgtcgaggacaagccg
ggtgtcacccgcgaccgggtcacctacgaggcggactggaacggccgccgcttcaaggtc
gtcgacaccggcggctgggagcaggacgttctcggcatcgacgcgtccgtggcgatgcag
gccgagttcgccatcgaggccgccgacgcggtggtcttcgtcgtcgacgccaaggtgggc
gcgaccgacaccgacgaggccgtcgtcaagctgctgcgccgggccggcaagccggtcgtg
ctggtcgccaacaaggtcgacggcccgtccggcgaggccgacgcggccatgctgtggtcg
ctgggcctcggcgagccgcacccggtctccgcgctgcacggccggggcaccggcgacatg
ctcgacgcggcgctggaggcgctgcccgaggcgcccgcgcagaccttcggccaggccgtc
ggcgggccgcgccgggtcgcgctgatcggccgtccgaacgtcggcaagtcctcgctgctg
aacaaggtcgccggcgaggagcgggtggtcgtcaacgaactggccggcaccacccgcgac
ccggtcgacgagctgatccaactcggcggcaagacctggaagttcgtggacaccgccggt
atccgccgccgggtgcacctccaggagggcgcggactactacgcctcgctgcgcaccgcg
gcggccgtggagaaggccgaggtcgcggtcgtcctgatcgacgcgggggagtccatcagc
gtccaggaccagcggatcatcacgatggcggtggaggccggccgggccctggtcatcgcc
tacaacaagtgggacaacctcgacgaggagcgccgcttctacctggagcgggagatcgag
cgggacctcgtccaggtcccgtgggcgatgcgggtgaacgtctccgcgcgcaccggccgc
cacatggagaagctcgtcccggccatcgagaccgcgctcgccggctgggagacccgcatc
cccaccggccggctgaacgccttcctcggtgagatcgtcgcctcccacccgcacccgatc
cgcggtggcaagcagccccgcatcctcttcggcacccaggccggcaccaagccgccccgc
ttcgtcctcttcgcctccggcttcctcgaggccggctaccgccgcttcatcgagcgccgc
ctgcgcgaggagttcggtttcgagggcacgccgatccacatttcggtgcgggtgcgggag
aagcgcggcaagaagaagtag
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