Streptomyces endophytica: OJ254_20250
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Entry
OJ254_20250 CDS
T09208
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
seng
Streptomyces endophytica
Brite
KEGG Orthology (KO) [BR:
seng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
seng03051
]
OJ254_20250 (pafA)
Enzymes [BR:
seng01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
OJ254_20250 (pafA)
Proteasome [BR:
seng03051
]
Prokaryotic proteasome
Bacterial regulatory particles
OJ254_20250 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Ribosomal_L19
Motif
Other DBs
NCBI-ProteinID:
UZJ32180
UniProt:
A0ABY6PFE8
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All DBs
Position
4534498..4535859
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AA seq
453 aa
AA seq
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MDRRIFGLENEYGVTCTFRGQRRLSPDEVARYLFRRVVSWGRSSNVFLRNGARLYLDVGS
HPEYATPECDNVTELVTHDKAGERILEGLLVDAERRLHEEGIAGDVYLFKNNTDSAGNSY
GCHENYLVARHGEFSRLADILIPFLVTRQLLCGAGKVLQTPRGAVYCVSQRAEHIWEGVS
SATTRSRPIINTRDEPHADAERYRRLHVIVGDSNMSETTMMLKVGATDLVLRMIEAGTVM
RDLTLENPIRAIREVSHDTTGQRKVRLASGREASALEVQQEYYEKAVDFCDRRGIRTGLV
ERVLELWGRTLEAIRDQELDRISTEIDWVMKHQLIERYRTKNNITMSHPRVAQIDLAYHD
IHRRRGLYYLLERKGQAARICNDLKIFEGKSVPPQTTRARLRGDFIRRAQEQRRDFTVDW
VHLKLNDQAQRTVLCKDPFRSVDDRVEKLIAGM
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggaccgccgcattttcgggctggagaacgagtacggcgtcacgtgcacgttcagggga
cagcgccgactgtcgcctgacgaagtggcgcggtacctcttccgccgtgtcgtgtcatgg
ggccgcagcagcaatgtcttcctgcggaacggcgcccgcctgtacttggacgtgggctcg
cacccggaatacgcaactcccgagtgcgacaacgtgaccgagctggtcactcacgacaag
gccggtgagcgcattctcgaaggcctgctcgtcgacgccgagcgccgcctgcatgaggag
ggaatcgcgggcgacgtctatctgttcaagaacaacaccgattcggcgggaaactcctac
ggctgccacgagaattacctcgtcgcccgccacggcgagttctcccggctcgcggacatc
ctcattccgttcctggtcacccgccagctgctgtgcggcgcgggcaaggtcctgcagacg
ccgcggggtgccgtctactgcgtcagccagcgcgcggagcacatctgggagggcgtctcc
tcggcgaccacccgctcccgcccgatcatcaacacccgtgacgaaccgcatgccgacgcc
gagcgctaccgccggctgcacgtcatcgtcggcgactcgaacatgtccgagacgacgatg
atgctcaaggtgggcgccacggacctcgtcctgcggatgatcgaggcgggcacggtcatg
cgcgatctgacgctggagaatccgatccgcgcgatccgcgaggtcagccacgacaccacc
ggacagcgcaaggtgcggctggccagcgggcgggaggcctcggcgctcgaagtccagcag
gagtactacgaaaaggcggtggatttctgcgaccgccgcggaatccgcaccggtctcgtg
gagcgcgtactggaactgtggggccgcaccctggaagcgatccgcgaccaggaactggac
cgcatctccaccgagatcgactgggtgatgaagcatcagctgatcgagcggtaccgcacg
aagaacaacatcacgatgtcccacccacgagtggcgcagatagacctcgcgtatcacgac
attcaccgccgccgggggctttactacctcctggagcggaaggggcaagccgcgcggatc
tgcaatgacttgaagatcttcgagggcaagtcggtgcccccgcagacgactcgggcccgg
ctgcgcggtgacttcatccgccgggcccaggaacagcgccgggatttcaccgtcgactgg
gtgcacctcaagctcaatgaccaggcgcagcgtacggtcctgtgcaaggacccgttccgt
tcggtggacgaccgggtggagaagctgatcgccgggatgtga
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