Streptomyces endophytica: OJ254_21080
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Entry
OJ254_21080 CDS
T09208
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
seng
Streptomyces endophytica
Pathway
seng00220
Arginine biosynthesis
seng00240
Pyrimidine metabolism
seng00250
Alanine, aspartate and glutamate metabolism
seng01100
Metabolic pathways
seng01110
Biosynthesis of secondary metabolites
seng01240
Biosynthesis of cofactors
Module
seng_M00978
Ornithine-ammonia cycle
Brite
KEGG Orthology (KO) [BR:
seng00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
OJ254_21080 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
OJ254_21080 (carB)
00220 Arginine biosynthesis
OJ254_21080 (carB)
Enzymes [BR:
seng01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
OJ254_21080 (carB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
MGS
CPSase_L_D3
Dala_Dala_lig_C
ATPgrasp_Ter
ATP-grasp
ATP-grasp_4
CoA_binding_2
ATP-grasp_5
Motif
Other DBs
NCBI-ProteinID:
UZJ32309
UniProt:
A0ABY6PEM2
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Position
4699074..4702382
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AA seq
1102 aa
AA seq
DB search
MPKRTDIQSVLVIGSGPIVIGQAAEFDYSGTQACRVLKSEGLRVILVNSNPATIMTDPEI
ADATYVEPITPEFVEKIIAKERPDALLPTLGGQTALNTAISLHEAGTLEKYGVELIGANV
EAINKGEDRDLFKEVVEAVRRKIGHGESARSVICHSMDDVLAGVEELGGYPVVVRPSFTM
GGAGSGFAHDEDELRRIAGQGLTLSPTTEVLLEESILGWKEYELELMRDKNDNVVVVCSI
ENFDPMGVHTGDSITVAPSMTLTDREYQILRDIGIAVIREVGVDTGGCNIQFAVNPEDGR
VIVIEMNPRVSRSSALASKATGFPIAKIAARLAVGYTLDEIPNDITEQTPASFEPTLDYV
VVKVPRFAFEKFPAADATLTTTMKSVGEAMAIGRNFPEALQKALRSLEKKGSQFDFAGEP
GDKAALLEKAQVPTDGRINTVMQAIRAGATPEEVFDATKIDPWFVDQLFLVKEIADEIAG
AEKLGPEILADAKRYGFSDAQIAAVRGLREDVVREVRHALGVRPVYKTVDTCAAEFAAKT
PYFYSSYDEETEVAPREKPAVIILGSGPNRIGQGIEFDYSCVHASFALSEAGYETVMVNC
NPETVSTDYDTSDRLYFEPLTLEDVLEIVHAETQAGPVAGVIVQLGGQTPLGLAQALKDN
GVPIVGTSPEAIDLAEERGAFGRVLTEAGLPAPKYGTAFSFDEAKRIATEIGYPVMVRPS
YVLGGRGMEIVYDEPSLGEYLTRHAGLIDRHPVLIDRFLDDAIEIDVDALYDGHELYLGG
VMEHIEEAGIHSGDSACALPPITLGGFDIKRLRASTEAIAKGVGVRGLINIQFAMAGDIL
YVLEANPRASRTVPFTSKATAVPLAKAAARISLGATIAELRAEGLLPKTGDGGTLPLDAP
ISVKEAVMPWSRFRDVHGRGVDTILGPEMRSTGEVMGIDSVFGTAYAKSQAGAYGALPTK
GRAFVSVANRDKRSMIFPARELVAHGFELLATSGTAEVLRRNGINATVVRKQSEGEGPNG
EKTIVQLIHAGEVDLIVNTPYGTGGRLDGYDIRTAAVARSVPCLTTVQALAAAVQGIEAM
NRGDVGVRSLQEHAEHLTAARD
NT seq
3309 nt
NT seq
+upstream
nt +downstream
nt
gtgcctaagcgcaccgatatccagtccgtcctggtcatcggctccggcccgatcgtcatc
ggccaggccgccgagttcgactactccggcacccaggcctgccgggtcctcaagtccgag
ggcctgcgcgtcatcctggtgaactccaacccggcgacgatcatgaccgacccggagatc
gccgacgcgacctacgtcgagccgatcaccccggaattcgtcgagaagatcatcgccaag
gagcgcccggacgccctgctgcccaccctgggcggccagaccgcgctcaacaccgccatc
tcgctgcacgaggcgggcaccctcgagaagtacggcgtcgagctgatcggcgcgaacgtc
gaggccatcaacaagggcgaggaccgcgacctcttcaaggaggtcgtcgaggccgtccgc
cggaagatcgggcacggcgagtccgcccgctcggtcatctgccactccatggacgacgtc
ctggcgggcgtcgaggagctcggcggctaccccgtcgtcgtccgcccgtccttcaccatg
ggcggcgccggctccggcttcgcgcacgacgaggacgagctgcgccggatcgccggccag
ggcctcacgctctccccgaccaccgaggtgctcctggaggagtccatcctcggctggaag
gagtacgagctggagctgatgcgcgacaagaacgacaacgtcgtggtcgtctgctccatc
gagaacttcgacccgatgggcgtccacaccggcgactcgatcaccgtcgcgccgtccatg
acgctcaccgaccgcgagtaccagatcctgcgggacatcggcatcgcggtcatccgcgag
gtcggcgtggacaccggcggctgcaacatccagttcgcggtgaaccccgaggacggtcgc
gtgatcgtcatcgagatgaacccgcgggtctcccgctcctcggcgctcgcctccaaggcc
accggcttcccgatcgcgaagatcgccgcccgcctcgccgtcggctacaccctcgacgag
atcccgaacgacatcaccgagcagaccccggcctccttcgagccgaccctcgactacgtc
gtcgtcaaggtgccgcggttcgccttcgagaagttcccggccgccgacgccacgctgacc
accaccatgaagtcggtcggcgaggccatggccatcggccgcaacttccccgaggcgctg
cagaaggcgctgcgctccctggagaagaagggcagccagttcgacttcgccggcgagccc
ggtgacaaggccgccctcctggagaaggcccaggtccccacagacggccggatcaacacc
gtcatgcaggcgatccgcgccggtgccacgcccgaggaggtcttcgacgccacgaagatc
gacccctggttcgtcgaccagctcttcctggtcaaggagatcgccgacgagatcgccggc
gccgagaagctcggcccggaaatcctcgcggatgcaaagcgctacggcttctcggacgcc
cagatcgccgcggtccgaggcctgcgcgaggacgtcgtgcgcgaggtccggcacgccctc
ggcgtccgcccggtctacaagaccgtcgacacctgcgccgccgaattcgccgcgaagacc
ccgtacttctactcgtcctacgacgaggagaccgaggtcgccccgcgcgagaagccggcc
gtgatcatcctcggctccggccccaaccgcatcggccagggcatcgagttcgactactcc
tgcgtgcacgcctcgttcgcgctgtccgaggccggctacgagaccgtcatggtcaactgc
aacccggagaccgtctcgacggactacgacacctccgaccgcctgtacttcgagccgctg
acgctggaagacgtgctggagatcgtgcacgccgagacccaggccgggccggtcgccggc
gtcatcgtccagctcggcgggcagaccccgctgggcctggcgcaggcgctcaaggacaac
ggcgtgccgatcgtcggcacctcgcccgaggccatcgacctcgccgaggagcgcggcgcc
ttcggccgggtcctcaccgaggccggcctgcccgctcccaagtacggcaccgccttctcc
ttcgacgaggccaagcggatcgccaccgagatcggctacccggtcatggtccggccgtcc
tacgtcctcggcggccgcggcatggagatcgtctacgacgagccgtcgctcggcgagtac
ctcacccgccacgccggcctgatcgaccgccacccggtcctcatcgaccgcttcctcgac
gacgccatagagatcgacgtcgacgcgctctacgacggccacgagctctacctcggcggc
gtcatggagcacatcgaggaggccggcatccactccggcgactccgcctgcgcgctgccc
ccgatcaccctcggcggcttcgacatcaagcggctgcgcgcctccaccgaggccatcgcc
aagggcgtgggcgtccgcggactgatcaacatccagttcgcgatggccggcgacatcctc
tacgtcctggaggccaacccccgcgcgtcccgcaccgtccccttcacctcgaaggcgacc
gcggtgccgctggccaaggccgccgcccggatctcgctcggcgccaccatcgccgaactg
cgcgcagagggcctgctgccgaagaccggcgacggcggcaccctgccgctggacgcgccg
atctccgtcaaggaggccgtgatgccgtggagccggttccgcgacgtgcacggccgcggc
gtggacaccatcctcggcccggagatgcgctccaccggcgaggtcatgggcatcgactcg
gtcttcggcaccgcctacgccaagtcgcaggccggggcgtacggcgcgctgcccaccaag
ggccgggcgttcgtctccgtcgccaaccgtgacaagcgctcgatgatcttcccggcgcgg
gaactggtcgcgcacggcttcgagctgctcgccacctccggcacggccgaggtgctgcgc
cgcaacggcatcaacgccaccgtcgtgcgcaagcagtccgagggcgagggcccgaacggc
gagaagaccatcgtccagctgatccacgccggcgaggtcgacctgatcgtcaacaccccg
tacggcaccggcggccgcctcgacggctacgacatccgtacggcggcggtggcccgctcc
gtgccctgcctcaccacggtccaggccctcgcggccgccgtccagggcatcgaggcgatg
aaccgcggcgacgtgggcgtcaggtcactccaggaacacgcggaacacctgaccgcggcc
cgcgactag
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