Streptomyces endophytica: OJ254_22035
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Entry
OJ254_22035 CDS
T09208
Name
(GenBank) SigB/SigF/SigG family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
seng
Streptomyces endophytica
Brite
KEGG Orthology (KO) [BR:
seng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
seng03021
]
OJ254_22035
Transcription machinery [BR:
seng03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
OJ254_22035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
MarR_2
HTH_Crp_2
HTH_31
Sigma70_ECF
HTH_3
HTH_23
HTH_24
Phage_antitermQ
MarR
HNF-1_N
HTH_16
Motif
Other DBs
NCBI-ProteinID:
UZJ32465
LinkDB
All DBs
Position
4920684..4921475
Genome browser
AA seq
263 aa
AA seq
DB search
MTSGAGSGRYAHLDPDTGPAFEELAVLADGDRKERLREEILRAWLPMAHRLARRYTGRGE
SDEDLRQVAALGLLKAIDAFDPRADTPFGAFAVPTIVGELKRHFRDAMWAVHVPRSVKDL
RTKVFRAREELVARAGQQEVTVGDLAAHTGLTQEEVLLGLDAENTFTTLSLERPLGGDGS
DTLGELVGQEDPALALVDDRAAATAGLRMLPERERRILYLRYFMGLTQKEIGDRVGLSQM
HISRLLRRSCDFVREQTFAAPRT
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgaccagcggtgccggttccggccggtacgcgcacctggacccggacaccgggccggcc
ttcgaggaactggccgtactggccgacggtgaccgcaaggagaggctgcgcgaggagatc
ctgcgggcctggctgccgatggcccaccggctggcccggcgctacaccggccgcggggag
agcgacgaggacctgcggcaggtggccgcgctcggcctgctcaaggcgatcgacgcgttc
gacccgcgggcggacaccccgttcggcgcgttcgcggtgcccaccatcgtcggcgagctc
aagcggcacttccgcgacgcgatgtgggcggtgcacgtcccacgcagcgtcaaggacctg
cggaccaaggtcttccgcgcccgcgaggagctggtcgcccgcgccggtcagcaggaggtc
accgtgggcgacctggccgcccacaccggcctgacccaggaggaggtcctgctcggcctc
gacgccgagaacaccttcaccacgctgtccctggaacggcccctgggcggcgacggctcc
gacacgctcggcgaactcgtcgggcaggaggacccggccctggccctggtcgacgaccgc
gcggcggccaccgcgggcctgcggatgctcccggagcgtgagcggcgcatcctctacctg
cgctacttcatgggcctcacgcagaaggaaataggcgaccgggtcggcctctcccagatg
cacatctcccgcctgctgcgccgctcctgcgacttcgtccgcgaacagaccttcgccgcc
ccgcggacgtag
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