Streptomyces endophytica: OJ254_25195
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Entry
OJ254_25195 CDS
T09208
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
seng
Streptomyces endophytica
Brite
KEGG Orthology (KO) [BR:
seng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
seng03400
]
OJ254_25195
DNA repair and recombination proteins [BR:
seng03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
OJ254_25195
Archaeal homologous recombinant proteins
OJ254_25195
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_27
AAA_29
SMC_N
AAA
Motif
Other DBs
NCBI-ProteinID:
UZJ32991
UniProt:
A0ABY6PGR0
LinkDB
All DBs
Position
complement(5638383..5641562)
Genome browser
AA seq
1059 aa
AA seq
DB search
MRLHRLTVTAFGPFGGTQTIDFDRLTRDGLFLLHGPTGAGKTSVLDAVCFALYGSVPGAR
QSGQALRSDLADPLTLTEVVLELTVAERRLEITRLPEQPRPKKRGSGTTREKAQSRLREF
VPAGAQERAAGGAGHWKALSRSHQEIGEEIGQLLGMSKEQFCQVVLLPQGEFARFLRADA
EARARLLGRLFDTRRFAALEEQLTARRRAAADEVAAGDERLLALAHRMAQAAGGTADAES
GDAAAFAGLLPAADSGRRTAAAVPAQGGAAGRRTAGAAGRTGRGTAAAPAEPDVPGPGEP
GFADAVLAGAAVARVTARERLDIHRCALHRAEEAERTAAGRLAEAGERHRLQQRYADARR
RADALEARAAEREATRARLARARTAAEVAPALALRDAAGRDLDAAQRADADCRGLLPPAL
ADASGDQLAARERELREELGSLAAARRTERRAAGIGAERAALDREARADEETLLDAGEWL
AQWDRARGAHQRRIESAQEAATRAEQLAARVEPAAERLAAARRRDRLAEEVRVAERELLT
ARERSAAAHEDWLDLKDRRLRGIAAELAEALTDGAACVVCGATEHPAPARAGAGHVDRAT
EEAALAAYRRAEETRRQAEQRCQSAKEELAGAAATAGDTPVAELAAQAEELRDGLAREHA
RGADLHAAREAFQRAEREHERRRTEQQQAERRVAARTSRREALDAERAALEEELARARAD
CASVAERAGHLERQVARLAAAAEASRTAHSCAERLKEADAALADAAYRAGFDTPREVAGA
LLRDEEWRALQQRLDDWQRESAATEAELSDPEVSAAAALPPADPEAARTAHQEAAARLRS
AATAHATAQHRAAELDRLSARAGADARALAPLRAAHDRIARLAALAAGTSGENERRMRLE
SYVLAARLEQVAAAASARLHRMSAGRYTLVHSDERTGGTRRSGLGLHVIDGWTGRERDTT
SLSGGETFFASLALALGLADVVTDEAGGTRLDTLFIDEGFGSLDEQTLDEVLDVLDSLRE
RDRSVGIVSHVADLKARIPAQLEVVKARTGSAVRHHVRT
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atgagactgcaccggctgaccgtcaccgcgttcgggccgttcggcggcacccagaccatc
gacttcgaccggctcacccgggacggcctgttcctgctgcacgggccgaccggcgccggc
aagacctccgtcctcgacgcggtctgcttcgcgctgtacgggtcggtgcccggggcgcgg
cagagcggccaggcactgcgcagcgacctggccgacccgctgaccctcaccgaggtcgtc
ctcgaactcaccgtggccgaacggcggttggagatcacccggctgccggagcagccgcgg
cccaagaagcgcggcagcggtacgacgagggagaaggcgcagagccggctgcgggagttc
gtaccggccggagcgcaggaacgggcggccggcggcgcggggcactggaaggcgctgagc
cgctcgcaccaggagatcggggaggagatcgggcagctgctcggcatgagcaaggagcag
ttctgccaggtcgtgctgttgccgcagggcgagttcgcgcgcttcctgcgggccgacgcc
gaggcccgcgcccggctgctcggccggctcttcgacacccgccggttcgccgcgctggag
gagcagctgaccgcgcgccgccgggccgccgccgacgaggtcgcggcgggcgacgaacgg
ctgctggcgctggcgcaccggatggcgcaggcggccggcgggaccgcggacgcggagtcc
ggcgacgccgcggccttcgcggggctgctgcccgccgcggactccggccggcgtaccgcg
gccgcggtcccggcccagggcggcgccgccggacggcgtaccgcgggcgcggccgggcgt
accggacgcggcaccgcggccgcccccgcggagccggacgtgccagggccgggcgagccg
ggattcgccgacgcggtgctggccggcgccgccgtcgcccgggtgaccgcacgggagcgg
ctggacatccaccgctgcgcactgcaccgggccgaggaggccgaacggaccgcggccggc
cggctggcggaggccggcgaacggcaccggctccagcagcgctatgcggacgcccgccgc
cgggccgatgcgctggaggcccgggccgcggaacgggaagcgacccgggcgaggctggcc
cgggcccgcaccgccgcggaggtggcgcccgcgctcgccctgcgcgacgccgccggacgc
gacctggacgccgcccagcgcgccgacgcggactgccgcggccttctgccgccggccctc
gccgacgcctcgggcgaccaactcgcggccagggagcgggagttgcgggaggagctgggc
tcgctcgcggcggcccggcggaccgagcggcgggccgccgggatcggcgcggaacgggcc
gcactggaccgcgaggcgcgcgccgacgaagagaccctgctggacgccggcgagtggctc
gcccagtgggaccgggcccgtggtgcccaccagcggcgcatcgagtcggcccaggaggcc
gcgacccgggccgagcagctcgccgcccgcgtcgaaccggccgccgaacggctcgccgcg
gcccggcggcgcgaccgccttgccgaagaagtacgcgtcgccgaacgggagttgctcacc
gcccgggaacggtccgcggccgcccacgaggactggctcgacctcaaggaccggcggctg
cgcgggatcgccgccgagctcgcggaggcgctgacggacggcgcggcctgcgtggtgtgc
ggcgccaccgagcacccggcgccggcccgggccggcgccggccatgtcgaccgcgccacc
gaggaggccgcactcgcggcgtaccgccgggccgaggagacccggcggcaggcggagcag
cgctgccagtccgccaaggaggagctggccggtgccgccgccaccgcgggggacaccccg
gtggccgaactcgccgcgcaggccgaggagttgcgggacggtctggcccgcgagcacgcc
cggggcgccgatctgcatgccgcccgcgaggcgttccagcgggccgagcgggagcacgaa
cgacgccgcaccgagcagcagcaggccgagcgccgggtcgccgcccgcacctcccgccgt
gaggcactggacgccgaacgggccgcgctggaggaggagttggcgcgggcccgggcggac
tgcgcgagcgtggcagaacgggccgggcacctggagcggcaggtggcccggctggccgcc
gcggccgaggcgtcccgtacggcgcactcctgcgccgagcggctcaaggaggccgacgcc
gcgctcgccgacgccgcctaccgggccgggttcgacaccccgcgggaggtcgccggcgca
ctgctgcgggacgaggaatggcgggccctgcagcagcggctcgacgactggcagcgggaa
tccgccgcgaccgaggcggaactgtccgacccggaggtgtccgccgcggccgccctgccg
cccgcggatccggaggccgcccggaccgcgcaccaggaggcggcggcgcggctgcggtcc
gccgccacggcgcacgccaccgcccagcaccgcgccgccgaactcgaccggctctccgcg
cgtgccggggccgacgcccgggcgctggccccgctgcgcgccgcccacgaccgcatcgcc
cggctcgccgccctggccgccggcacgtccggcgagaacgagcggcggatgcggctggag
tcgtacgtcctcgccgcccggctcgaacaggtcgcggccgcggccagcgcccggctgcac
cggatgtcggccggccgctacaccctcgtccactccgacgagcggaccggcggcacccgc
cgctccgggctcggtctgcacgtcatcgacggctggaccggccgggagcgggacaccacc
agcctctccggcggggagaccttcttcgcctcgctcgcgctggccctcggactcgccgac
gttgtcaccgacgaggccggcggcacgcggctggacaccctcttcatcgacgagggcttc
ggcagcctcgacgagcagaccctcgacgaggtgctggacgtcctggactcgctgcgcgaa
cgcgaccggagcgtcggcatcgtcagccacgtcgcggacctcaaggcccgcatccccgcc
cagctggaggtcgtcaaggcccgcacgggctcggcggtacggcaccacgtgcggacttga
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