Streptomyces endophytica: OJ254_27875
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Entry
OJ254_27875 CDS
T09208
Name
(GenBank) DNA photolyase family protein
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
seng
Streptomyces endophytica
Brite
KEGG Orthology (KO) [BR:
seng00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
seng03400
]
OJ254_27875
Enzymes [BR:
seng01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
OJ254_27875
DNA repair and recombination proteins [BR:
seng03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
OJ254_27875
Prokaryotic type
OJ254_27875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
UZJ33400
LinkDB
All DBs
Position
6243769..6245148
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AA seq
459 aa
AA seq
DB search
MDVAICLFSSDLRVHDQPVLRAASRAATRVVPLFVVDTGIARAGFMVPNRAAFLAGALAD
LDAQLRERGGRLVIRTGDVVAETCRVAAEAGAGEVHLAAGVSGYAQRRERRLAEALAGDG
RALVVHDAVITAVPPGAVLPTGPGRDHFAVFTPYFRRWRAEKLRAMLPAPRSVPVPDGVR
SGAVPSAKELCPRGRPSPALPEGGERAGRRRFASWQRSGLAAYEERHDDLAGDATSRLSP
YLHFGCLSPVELVHKASGRSGAGPESFVRQLAWRDFHHQVLAARPDAAGADYRARGDRWR
RVDTEVAAWKEGRTGIPVVDAAMRQLRHEGWMHNRARMLVASFLTKTLYVDWRVGARHFL
DLLVDGDVANNQLNWQWMAGTGTDTRPNRVLNPLVQARRFDPEGEYVRRWVPELADLGGA
AVHRPWRLDAPERAAYDYPEPLVDLADAALRFRRARGQE
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggatgtggcgatctgtctgttcagttccgatctgcgggtgcacgatcagccggtgctg
cgggccgcgtcgcgggccgccacgcgggtggtgccgctgttcgtggtcgataccggcatc
gcgcgggccgggttcatggtgcccaaccgggccgccttcctggccggtgcgctggcggac
ctcgatgcgcaactgcgtgaacggggcggccggctggtcatccgtacgggcgacgtggtg
gccgagacctgccgggtcgcggcggaggccggggccggggaggtgcatctcgcggccggg
gtgagcggctatgcgcagcgcagggagcggcggttggccgaggcgctggccggggacggg
cgggcgctggtcgtccacgacgcggtgatcaccgccgtcccgccgggtgcggtgctgccc
accgggccgggccgggaccatttcgcggtcttcaccccgtacttccgccgctggcgggcg
gagaagctccgggcgatgctgccggccccgcggtcggtgccggtcccggacggggtgcgg
tccggcgcggtgccgtcggcgaaggaactgtgcccgcgcgggcggccgtcgccggcgctc
ccggagggcggcgagcgggccggccgccgccggttcgcgtcctggcagcggtccggtctg
gccgcctacgaggagcggcacgacgacctggcgggtgatgccacctcgcggctctcgccg
tatctgcacttcggctgtctctcgccggtggagctggtgcacaaggcgtccgggcgctcc
ggggccgggcccgagtccttcgtacgacagctggcctggcgggacttccaccaccaggtg
ctggccgcccgccccgacgcggcgggcgccgactaccgcgcccggggcgaccggtggcgg
cgggtggacacggaggtggcggcctggaaggagggccgcaccgggatcccggtggtcgac
gcggcgatgcggcagctgcggcacgaggggtggatgcacaaccgggcccggatgctggtg
gccagtttcctgaccaagaccctgtacgtggactggcgggtgggcgcccggcacttcctg
gacctgctggtggacggcgatgtggccaacaaccagctgaactggcagtggatggcgggg
accgggaccgacacccggcccaaccgggtgctcaatccgctcgtgcaggcccggcggttc
gacccggagggtgaatatgtgcggcgctgggtcccggagttggcggacctcggcggggcc
gccgtgcaccggccgtggcggctcgacgcgcccgagcgcgccgcgtacgactacccggag
ccgctggtggacctggcggacgcggcactgcggttccggcgggcgcgcgggcaggagtag
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