Salmonella enterica subsp. enterica serovar Typhimurium 138736: CY43_17090
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Entry
CY43_17090 CDS
T03493
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
seni
Salmonella enterica subsp. enterica serovar Typhimurium 138736
Pathway
seni03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
seni00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CY43_17090
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
seni03019
]
CY43_17090
03016 Transfer RNA biogenesis [BR:
seni03016
]
CY43_17090
Enzymes [BR:
seni01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CY43_17090
Messenger RNA biogenesis [BR:
seni03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CY43_17090
Transfer RNA biogenesis [BR:
seni03016
]
Prokaryotic type
tRNA degradation factors
CY43_17090
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
S1_2
KH_2
OB_RRP5_4th
aRib
OB_PDCD11
S1_RRP5
KH-I_KHDC4-BBP
KH_SLS1_2
Motif
Other DBs
NCBI-ProteinID:
AHX78990
UniProt:
A0A0J0X007
LinkDB
All DBs
Position
complement(3482513..3484648)
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AA seq
711 aa
AA seq
DB search
MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGQKKAKPGQDFFPLT
VNYQERTYAAGRIPGSFFRREGRPSEGETLIARLIDRPVRPLFPEGFVNEVQVIATVVSV
NPQVNPDIVAMIGASAALSLSGIPFNGPIGAARVGYINDQYVLNPTQDELKESKLDLVVA
GTEAAVLMVESEAELLSEDTMLGAVVFGHEQQQVVIQAINDLVKEAGKPRWDWQPEAVND
ALNARVAALAESRLSDAYRITDKQERYAQVDVIKSETIEQLIAEDETLDANELGEILHAI
EKNVVRSRVLAGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTAR
DAQVLDELMGERTDSFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPDMDK
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEGDNYVVLSD
ILGDEDHLGDMDFKVAGSRDGISALQMDIKIEGITKEIMQVALNQAKGARLHILGVMEQA
INAPRGDISEFAPRIHTIKISTDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAAT
DGEKAKYAIRRIEEITAEIEVGRIYNGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMGQEVPVKVLEVDRQGRVRLSIKEATEQSQPAAAPEAPASEQAE
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
ttgcttaatccgatcgttcgtaaattccagtacggtcagcataccgttacgctggaaact
ggcatgatggcgcgtcaggccactgccgctgttatggtaagcatggatgacaccgccgta
ttcgttaccgttgtcggccagaaaaaagccaagccaggccaggacttcttcccactgacc
gttaactatcaggagcgtacctacgctgctggtcgtatcccgggcagcttcttccgtcgt
gaaggccgtccaagcgaaggcgaaaccctgatcgcgcgtctgattgaccgcccggttcgt
ccgctgttcccggaaggcttcgttaacgaagtgcaggttatcgcgaccgtcgtttccgtt
aacccgcaggttaacccggatatcgtggcgatgatcggcgcatccgctgcgctgtcgctg
tccggcattccgttcaacggcccaatcggcgcggcgcgcgtaggttacatcaatgaccag
tacgtgctgaacccgacccaggacgagctgaaagaaagcaagctggacctggtggttgcc
ggtaccgaagcggctgtgctgatggtggaatccgaagctgaactgctgagcgaagacact
atgctgggcgcggtggtattcggtcacgagcagcagcaggttgttatccaggcgatcaac
gatctggtgaaagaagccggtaaaccgcgttgggactggcagccggaagccgtcaacgac
gcgttgaacgcgcgtgttgctgcgctggctgaatctcgtctgagcgacgcgtaccgcatc
accgataaacaagagcgctatgctcaggttgacgtaatcaaatccgaaaccatcgagcag
cttattgcagaagatgaaactctggatgctaacgagctgggcgaaatcctgcacgctatc
gagaaaaacgtggtgcgtagccgcgtactggcaggcgagccgcgtattgatggccgtgaa
aaagacatgatccgtggtctggacgtgcgcactggcgtactgccgcgtactcacggttcc
gctctgtttacccgtggtgaaacgcaggcgctggttaccgcaactctgggtactgcccgt
gacgcgcaggtgcttgatgaactgatgggcgagcgtactgacagcttcctgttccactac
aacttccctccgtactccgtaggcgaaaccggcatggtcggttctccgaagcgtcgtgaa
attggtcacggtcgtctggcgaagcgcggcgtgctggcagtgatgccggacatggataaa
ttcccgtacaccgttcgcgtggtgtctgaaatcaccgaatccaacggttcttcttctatg
gcttccgtgtgcggcgcttctctggcgctgatggacgctggcgtgccaattaaagccgcc
gtagcaggtatcgctatgggtctggtgaaagaaggcgacaactacgttgtactgtctgac
attctgggcgacgaagatcacctgggcgatatggacttcaaagtggcgggttcccgcgac
ggtatctctgcgctgcagatggatatcaaaattgaaggtatcaccaaagagatcatgcag
gttgcgttgaaccaggctaaaggtgcgcgtctgcacatcctgggcgtgatggaacaggcg
atcaacgcgccgcgcggcgatatctctgaatttgcgccgcgtatccataccatcaagatc
agcacggacaagatcaaagacgtgatcggtaaaggcggttctgtgatccgcgcgctgact
gaagagaccggcaccaccatcgaaatcgaagatgacggtactgtgaagatcgcggcgacc
gacggtgaaaaagcgaaatacgctatccgtcgtatcgaagagatcaccgcagagatcgaa
gtcggccgtatctacaatggtaaagtgacccgtatcgttgactttggcgcgtttgttgcc
atcggcggcgggaaagaaggtctggttcacatctctcaaatcgcggataaacgtgtagag
aaagtgaccgactatctgcagatgggtcaggaagtcccggttaaggttctggaagttgac
cgccagggccgtgtacgtctgagcattaaagaagcaaccgagcagtctcaacctgcggct
gcgccggaagctccggcgagcgaacaggccgagtaa
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